| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183755
Identifier: 189183755
GI number: 189183755
Start: 892171
End: 892347
Strand: Reverse
Name: 189183755
Synonym: OTT_0848
Alternate gene names: NA
Gene position: 892347-892171 (Counterclockwise)
Preceding gene: 189183758
Following gene: 189183749
Centisome position: 44.42
GC content: 32.77
Gene sequence:
>177_bases ATGGGTAGAAGCCCCCTAGTTAAACACTCAAACTTTGCTCTTACAGGTCGTAAAGCTATAATGAAGAGTAATATGAATTA TGAAGTAGTCTTGATTGATGCTACTGAGAGTTCTATAGAAAGACCTAAAAAAAACAAAAATTCTATTATTCAGGAAAGAA GAAAAGGCATACACTAA
Upstream 100 bases:
>100_bases AGTTGCTGATGGTGTTAGAATACCTTAGAGAATACCGTACTTATTTCCATATAGGCCAGAACTGTGGGATTAGTGAAAGT TCAGCATATAAAGCTGTAAA
Downstream 100 bases:
>100_bases AAACTCAAATAGTGGTAGACAAGAAAACCTACCAAGTAATATGAACAGATTTTTCTAACGGTAAAAAACATGACTTTAGA TTATTTAATGAATCCAAAAT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MGRSPLVKHSNFALTGRKAIMKSNMNYEVVLIDATESSIERPKKNKNSIIQERRKGIH
Sequences:
>Translated_58_residues MGRSPLVKHSNFALTGRKAIMKSNMNYEVVLIDATESSIERPKKNKNSIIQERRKGIH >Mature_57_residues GRSPLVKHSNFALTGRKAIMKSNMNYEVVLIDATESSIERPKKNKNSIIQERRKGIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6624; Mature: 6493
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSPLVKHSNFALTGRKAIMKSNMNYEVVLIDATESSIERPKKNKNSIIQERRKGIH CCCCCCCCCCCEEECCHHHHHHCCCCEEEEEEECCCHHHHCCCCCHHHHHHHHHCCCC >Mature Secondary Structure GRSPLVKHSNFALTGRKAIMKSNMNYEVVLIDATESSIERPKKNKNSIIQERRKGIH CCCCCCCCCCEEECCHHHHHHCCCCEEEEEEECCCHHHHCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA