| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is 189183748
Identifier: 189183748
GI number: 189183748
Start: 887229
End: 887531
Strand: Reverse
Name: 189183748
Synonym: OTT_0841
Alternate gene names: NA
Gene position: 887531-887229 (Counterclockwise)
Preceding gene: 189183749
Following gene: 189183746
Centisome position: 44.18
GC content: 30.03
Gene sequence:
>303_bases TTGTTTGGTGATAAAGCTTACATATCTAAAGAGTTATTTCATCAACTGCTGACCAATGGTCTACGTTTATTTACTAATCT TCGTAAAGATATGAAAACATATTTATTGGACATACAAGATAAGAAGTTATTAAATAAACGTTCTTTAATTGAGTCTGTCT TTAATGTACTAAAAAAACATATGCATTTAGAGCATACTAGACACTGTTCTCCTCTTAATTTCTTTGTGCATATAATTGCT TCTCTTGCTAGTTATTCTATCTCTAAACTTAATCCCCATCCTATCATCTTCTTCTTCTCCTGA
Upstream 100 bases:
>100_bases TAATAATAAAGGTGAAATAAAATGTTAGTTAAATTTACTAAATGTAATAAAAGCACCCTAATCTGTATCTTCAGTTTTTT CTAAATGCTTATCTGGTAAA
Downstream 100 bases:
>100_bases CTCATTATCCTAAATTGACGTTTGTAGACCTTTTTCATTACGTTTTTCATACTTTCCCTTATCCTAATTTGGCGTTATAA GCCTTTCAGAGGCTTATATG
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKKLLNKRSLIESVFNVLKKHMHLEHTRHCSPLNFFVHIIA SLASYSISKLNPHPIIFFFS
Sequences:
>Translated_100_residues MFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKKLLNKRSLIESVFNVLKKHMHLEHTRHCSPLNFFVHIIA SLASYSISKLNPHPIIFFFS >Mature_100_residues MFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKKLLNKRSLIESVFNVLKKHMHLEHTRHCSPLNFFVHIIA SLASYSISKLNPHPIIFFFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11804; Mature: 11804
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKKLLNKRSLIESVFNVLKKH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MHLEHTRHCSPLNFFVHIIASLASYSISKLNPHPIIFFFS HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDKKLLNKRSLIESVFNVLKKH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MHLEHTRHCSPLNFFVHIIASLASYSISKLNPHPIIFFFS HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA