| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183724
Identifier: 189183724
GI number: 189183724
Start: 857182
End: 857484
Strand: Reverse
Name: 189183724
Synonym: OTT_0817
Alternate gene names: NA
Gene position: 857484-857182 (Counterclockwise)
Preceding gene: 189183725
Following gene: 189183719
Centisome position: 42.68
GC content: 29.04
Gene sequence:
>303_bases ATGAAAAAATGTATTATAACAGTATACTATTTAATAGATAATTTTTGCAAGATATATCAAGAGTGGGAAAGAAAGAGATT AATGCCAAGTAGCAATCAAAGGAACAGAGATGGAAAGTTGTCCTTAGCTGAGTTATTAACAGTAGTGATATATTTTTATT TGTCTCCATGCAAGGATTGTAAAAATTATTATCTATATTACTTGAGTCATAAGTATAAAAGATATAGCAATAACGTAGGA AATAGGTACAATCAGATAAACTGCATTACGTGTGCTACAGCCATGCTAATATCTTTGAATTGA
Upstream 100 bases:
>100_bases ATTTAGGATAAGTGGAAATATGAAAGGTAGTGAATAAAAAGTATACAAAGAGAGAATGCTGAGTTATAAAAAAATTTAAA TAAAAAAGGAATAACTCAAC
Downstream 100 bases:
>100_bases GGAGTAACTTTTCTTATTTCGTTCTTAATCTTAAACCAATAATGTTCTATAGGATTTAAATCTGGACTATATGTAGGTAA GAATAGAATACTGCAGCCAA
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MKKCIITVYYLIDNFCKIYQEWERKRLMPSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYSNNVG NRYNQINCITCATAMLISLN
Sequences:
>Translated_100_residues MKKCIITVYYLIDNFCKIYQEWERKRLMPSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYSNNVG NRYNQINCITCATAMLISLN >Mature_100_residues MKKCIITVYYLIDNFCKIYQEWERKRLMPSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYSNNVG NRYNQINCITCATAMLISLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12037; Mature: 12037
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCIITVYYLIDNFCKIYQEWERKRLMPSSNQRNRDGKLSLAELLTVVIYFYLSPCKDC CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH KNYYLYYLSHKYKRYSNNVGNRYNQINCITCATAMLISLN HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKCIITVYYLIDNFCKIYQEWERKRLMPSSNQRNRDGKLSLAELLTVVIYFYLSPCKDC CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH KNYYLYYLSHKYKRYSNNVGNRYNQINCITCATAMLISLN HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA