| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183719
Identifier: 189183719
GI number: 189183719
Start: 855461
End: 855769
Strand: Reverse
Name: 189183719
Synonym: OTT_0812
Alternate gene names: NA
Gene position: 855769-855461 (Counterclockwise)
Preceding gene: 189183724
Following gene: 189183712
Centisome position: 42.6
GC content: 30.74
Gene sequence:
>309_bases ATGTACCTATTTCCTATGTTAGCGCTATACTTTTGTTTAGCAAGCTATAGTATGATAATACAACTGTGGTCTAGAATATT GCTACCATTAGTCATATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATTACATCGATTCTACAAAGTTAGCAA TTTGTCATAATACACGTCCCTCAAGCAATAGAGTTTTTAACAGAATTTCTAAAATTGGTAAAAGTAGTTATGGCTTGTTC TTAGACTTTAAGCTTCATCTTATAATCAATAACAAAGGCGAAATAATGTCAGTTAAAATCAGGCAATAA
Upstream 100 bases:
>100_bases TCATCTAGGGCTTTGAATAGCTTCATTCTTAAATCGTAACTGTAACTTTTTGCCATTATTTATACTCTTATTATTTATAC TCTTTACATATTAGCATATT
Downstream 100 bases:
>100_bases AAGCGACCTATCTGTAGCTTCAGTTTTTTCCTAAAGGCTTATCTAGTAAACTGTTTAGTGATAAAGCCTACATATCTAAG GAGTTATTTTATCAACTGCT
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase And Inactivated Derivative; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family; Transposase IS; IS4 Family Transposase
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MYLFPMLALYFCLASYSMIIQLWSRILLPLVILMHYLKGEETGIYYIDSTKLAICHNTRPSSNRVFNRISKIGKSSYGLF LDFKLHLIINNKGEIMSVKIRQ
Sequences:
>Translated_102_residues MYLFPMLALYFCLASYSMIIQLWSRILLPLVILMHYLKGEETGIYYIDSTKLAICHNTRPSSNRVFNRISKIGKSSYGLF LDFKLHLIINNKGEIMSVKIRQ >Mature_102_residues MYLFPMLALYFCLASYSMIIQLWSRILLPLVILMHYLKGEETGIYYIDSTKLAICHNTRPSSNRVFNRISKIGKSSYGLF LDFKLHLIINNKGEIMSVKIRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11908; Mature: 11908
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLFPMLALYFCLASYSMIIQLWSRILLPLVILMHYLKGEETGIYYIDSTKLAICHNTRP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCC SSNRVFNRISKIGKSSYGLFLDFKLHLIINNKGEIMSVKIRQ CHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEEECC >Mature Secondary Structure MYLFPMLALYFCLASYSMIIQLWSRILLPLVILMHYLKGEETGIYYIDSTKLAICHNTRP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCC SSNRVFNRISKIGKSSYGLFLDFKLHLIINNKGEIMSVKIRQ CHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA