| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183604
Identifier: 189183604
GI number: 189183604
Start: 726887
End: 727192
Strand: Reverse
Name: 189183604
Synonym: OTT_0697
Alternate gene names: NA
Gene position: 727192-726887 (Counterclockwise)
Preceding gene: 189183605
Following gene: 189183599
Centisome position: 36.2
GC content: 33.01
Gene sequence:
>306_bases TTGTCTAAGCAAATTCTAAGTGGAGATTTTTCGTTATTTGAGAATGATGATCAAATATTTATCAGCTTAGAAGCAAGAAA GAGGCCTGCAGAGTCGAAATTATCTGCTATGGATCTGTTTTTAGGTAATGAAATGCGTCGTGATGAATATATAAAATCAA ATTTCCTGATTCATTTTGGTCTGCAAATTTTACTAAATCAAGCAATGGAAAGGACTGCAGCCATAACTAAAAGAGAAGCG CTAGAAAGAAATATTAATGCAGGAATGTTTTTTTTCCTGATATACAGCAAGAAGCAGAAGATTTAG
Upstream 100 bases:
>100_bases AAGTACTTAAAATGTGAATGCACAGCAATTATTAAAGTTTTTAAGAGTAATATTTGGCTGGCCTGAAGAAGAACATTAAG AGATTAACCAGTATGAAATA
Downstream 100 bases:
>100_bases CAGGCGTAGTAGCTGCTTTACAGAGTGGTAATAGAGTTGTTAATATTCACTTCAATGTTATTATGTTTGATAAAATAAAG AAAGCTAAGCAATCTGCATC
Product: putative conjugative transfer protein TraC
Products: NA
Alternate protein names: Conjugative Transfer Protein TraB
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSKQILSGDFSLFENDDQIFISLEARKRPAESKLSAMDLFLGNEMRRDEYIKSNFLIHFGLQILLNQAMERTAAITKREA LERNINAGMFFFLIYSKKQKI
Sequences:
>Translated_101_residues MSKQILSGDFSLFENDDQIFISLEARKRPAESKLSAMDLFLGNEMRRDEYIKSNFLIHFGLQILLNQAMERTAAITKREA LERNINAGMFFFLIYSKKQKI >Mature_100_residues SKQILSGDFSLFENDDQIFISLEARKRPAESKLSAMDLFLGNEMRRDEYIKSNFLIHFGLQILLNQAMERTAAITKREAL ERNINAGMFFFLIYSKKQKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11797; Mature: 11666
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQILSGDFSLFENDDQIFISLEARKRPAESKLSAMDLFLGNEMRRDEYIKSNFLIHFG CCCCCCCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LQILLNQAMERTAAITKREALERNINAGMFFFLIYSKKQKI HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC >Mature Secondary Structure SKQILSGDFSLFENDDQIFISLEARKRPAESKLSAMDLFLGNEMRRDEYIKSNFLIHFG CCCCCCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LQILLNQAMERTAAITKREALERNINAGMFFFLIYSKKQKI HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA