| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is 189183605
Identifier: 189183605
GI number: 189183605
Start: 727402
End: 728088
Strand: Reverse
Name: 189183605
Synonym: OTT_0698
Alternate gene names: NA
Gene position: 728088-727402 (Counterclockwise)
Preceding gene: 189183606
Following gene: 189183604
Centisome position: 36.24
GC content: 35.23
Gene sequence:
>687_bases ATGAGAAATGCTGTTGCTGATAGGCTTGGCGTATCTATAGGTATTGCAATGTTTGCTTCTCTTTCCTCGCAAACGAGTTA TTTTGTATCTAAAATGTTGGAAAATCATCTTTTACCGGCTTATGAAGGACTATCGAGCAGAAAAACTGGTATTATGTTTG GAGCTAAGGCTGTAGCTAAGATTCGAGATGTGCAAATACATGATCCAGTAACTTTAACTAATACTAAGGAATTTCTTAGA CAATGCTTTATGAAGCCTTACATCATAGGTAATATCTTAGGTAAAAAAGCAGCTGCTCAACAAACTAATGATATCATAGG ATTTATCGAGCAGAATATACCTAATAATTTCGGTATTTATTATCGCGAACCTAGTAATTTAGGTATTAGTTTCAAGACAT GCAGACAAGCTACTCCATTAATTAAGGCAGCAATTCATAAAGAATTAAACGAAGGACTTCTAACCAAGTTTGCAGCTGCG ATTGGAGTTCAATCTGATCAGTCACACATGTTAAGTCAAAGACTAAAAGTCATGACTGGAGATACACTAAAATATCTACA AAGAGAACAACAAGACATTCATGAATGGATGAAGCAAGCTATGCTACTTAATGCTAATCGTGAGTCATATGATGACTGGC GTGAGAAGTTTTCATTATCACGAATTTATCCTAATCTGGCGTTATAA
Upstream 100 bases:
>100_bases GGTGAAGATTTTGGTTACTTGATTTGGCGAAAAAGAGATTGCTGTTTGCAATGAAAAAATATACAAGTTAGCATGTGATA GCAAAATGGCCGTAAGACGA
Downstream 100 bases:
>100_bases AGGATGTAGTATTGTTGATTTCAGTAACTATACCTAATTTAAATACAAATATCGATGATATGATTCGCAGACGAGATGTT TTAAAAGATACGTTTAGGTC
Product: putative conjugative transfer protein TraG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MRNAVADRLGVSIGIAMFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIHDPVTLTNTKEFLR QCFMKPYIIGNILGKKAAAQQTNDIIGFIEQNIPNNFGIYYREPSNLGISFKTCRQATPLIKAAIHKELNEGLLTKFAAA IGVQSDQSHMLSQRLKVMTGDTLKYLQREQQDIHEWMKQAMLLNANRESYDDWREKFSLSRIYPNLAL
Sequences:
>Translated_228_residues MRNAVADRLGVSIGIAMFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIHDPVTLTNTKEFLR QCFMKPYIIGNILGKKAAAQQTNDIIGFIEQNIPNNFGIYYREPSNLGISFKTCRQATPLIKAAIHKELNEGLLTKFAAA IGVQSDQSHMLSQRLKVMTGDTLKYLQREQQDIHEWMKQAMLLNANRESYDDWREKFSLSRIYPNLAL >Mature_228_residues MRNAVADRLGVSIGIAMFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIHDPVTLTNTKEFLR QCFMKPYIIGNILGKKAAAQQTNDIIGFIEQNIPNNFGIYYREPSNLGISFKTCRQATPLIKAAIHKELNEGLLTKFAAA IGVQSDQSHMLSQRLKVMTGDTLKYLQREQQDIHEWMKQAMLLNANRESYDDWREKFSLSRIYPNLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25793; Mature: 25793
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNAVADRLGVSIGIAMFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHH IRDVQIHDPVTLTNTKEFLRQCFMKPYIIGNILGKKAAAQQTNDIIGFIEQNIPNNFGIY HHHEEECCCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE YREPSNLGISFKTCRQATPLIKAAIHKELNEGLLTKFAAAIGVQSDQSHMLSQRLKVMTG EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC DTLKYLQREQQDIHEWMKQAMLLNANRESYDDWREKFSLSRIYPNLAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRNAVADRLGVSIGIAMFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHH IRDVQIHDPVTLTNTKEFLRQCFMKPYIIGNILGKKAAAQQTNDIIGFIEQNIPNNFGIY HHHEEECCCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE YREPSNLGISFKTCRQATPLIKAAIHKELNEGLLTKFAAAIGVQSDQSHMLSQRLKVMTG EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC DTLKYLQREQQDIHEWMKQAMLLNANRESYDDWREKFSLSRIYPNLAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA