| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183599
Identifier: 189183599
GI number: 189183599
Start: 720442
End: 720717
Strand: Reverse
Name: 189183599
Synonym: OTT_0692
Alternate gene names: NA
Gene position: 720717-720442 (Counterclockwise)
Preceding gene: 189183604
Following gene: 189183598
Centisome position: 35.87
GC content: 29.71
Gene sequence:
>276_bases TTGAGTTATAAGTATAAAGGATACTTTTGTTTACCAAGTTATAGTAGAATAATACAACTGTGGCCTAGAATGTTGCTACC ATTAGTCGTATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATTACATCAATTCTACAAAGTTAGCAATTTGTC ATAATAAATGTACCTCAAGCAATAGAGTTTTTAACAAAATTTCTAAAATTGGTGAGAGTAGTTATGGCTTGTTCTTAGGC TTTAAGCTACATCTTGTAATAATAAAGGCGAAATAA
Upstream 100 bases:
>100_bases GCATATGTTTTTTTAGTACATTAAAGACAGACTCAATTAAAGAACGTTTATTTAATAATCGATTATCTTGTATGTCTAAT AAATATGTTTTCATAATTAC
Downstream 100 bases:
>100_bases TGTCATTTAAAATTACTAAAGGCAATAAAAGCGATCTATCTATAGCCTCAGTTATTTCTGAAGGCCTATCTGGTAAATTG TTTGGTGATAAAGCTTACAT
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; Transposase And Inactivated Derivative; Transposase IS4 Family; Transposase IS; ISPg3 Transposase; IS4 Family Transposase
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLMHYLKGEETGIYYINSTKLAICHNKCTSSNRVFNKISKIGESSYGLFLG FKLHLVIIKAK
Sequences:
>Translated_91_residues MSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLMHYLKGEETGIYYINSTKLAICHNKCTSSNRVFNKISKIGESSYGLFLG FKLHLVIIKAK >Mature_90_residues SYKYKGYFCLPSYSRIIQLWPRMLLPLVVLMHYLKGEETGIYYINSTKLAICHNKCTSSNRVFNKISKIGESSYGLFLGF KLHLVIIKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10571; Mature: 10440
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKYKGYFCLPSYSRIIQLWPRMLLPLVVLMHYLKGEETGIYYINSTKLAICHNKCTSS CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCC NRVFNKISKIGESSYGLFLGFKLHLVIIKAK HHHHHHHHHHCCCCCCEEEEEEEEEEEEEEC >Mature Secondary Structure SYKYKGYFCLPSYSRIIQLWPRMLLPLVVLMHYLKGEETGIYYINSTKLAICHNKCTSS CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCC NRVFNKISKIGESSYGLFLGFKLHLVIIKAK HHHHHHHHHHCCCCCCEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA