| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183409
Identifier: 189183409
GI number: 189183409
Start: 519687
End: 520445
Strand: Reverse
Name: 189183409
Synonym: OTT_0502
Alternate gene names: NA
Gene position: 520445-519687 (Counterclockwise)
Preceding gene: 189183410
Following gene: 189183407
Centisome position: 25.91
GC content: 28.59
Gene sequence:
>759_bases TTGTTCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATGTATCTCCATGTAAGGATTGTAAAAATTATTATCTATA TTACTTGAGTCATAAGTATAAAAGATACTTTTGTTTACCAAGTTATAGTAGAATAATACAACTGTGGCCTAGAATGTTAC TACAGCTAGCTGTATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATTATATCGATTCTACAAAGTTAGCAATT TGTCATAACAAACACATTTTCAGCAATAGAGTTTTTAACAAAATTTCTAAAATTGGTAAGAGTAGTTATGGCTGGTTCTT ATGCTTTAAGCTTCATCTTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAATTACTAAAGGCAATAAAAGTGACC TATCTGTAGCTTCAGTTTTTTCTGAAGGCTTATCTGGTAAATTGTTTGGTGATAAAGCTTACATATCTAAAGAGTTATTT CATCAACTGCTGACCAATGGTATACGTTTATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTGGACATACAAGA TAATCGATTATTAAATAAACGTTCTTTAATTGAGTCTGTCTTTAATGTACTAAAAAAACATATGCATTTAGAGCATACTA GACACCGTTCTCTTCTTAATTTCTTTGTTCATATAATTGCTTCTCTTGCTAGTTATTCTATCTCTACACTTAATCCCTAC CTTATCTCCTCTTCTTTTTCTTCATTCAACTTATCTTAA
Upstream 100 bases:
>100_bases ACAGTTATACTATTTAATAGACAATTTTTGCAAGATATATCAAGAGTGTGAGAGAAAGAGATTAATACCAAGTAGTAATC AAAGGAACAGAGATGGGAAG
Downstream 100 bases:
>100_bases TCTAGCGTTAATAGTTAAGAATTGCTGTTTTATAGTTTTTATTCCACCAACGTAAAATGCTACTTCAATGTTATCATTCA TAATCCTTATTACTGTGCCT
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS; Protease
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLQLAVLMHYLKGEETGIYYIDSTKLAI CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVFSEGLSGKLFGDKAYISKELF HQLLTNGIRLFTNLRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSLLNFFVHIIASLASYSISTLNPY LISSSFSSFNLS
Sequences:
>Translated_252_residues MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLQLAVLMHYLKGEETGIYYIDSTKLAI CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVFSEGLSGKLFGDKAYISKELF HQLLTNGIRLFTNLRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSLLNFFVHIIASLASYSISTLNPY LISSSFSSFNLS >Mature_252_residues MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLQLAVLMHYLKGEETGIYYIDSTKLAI CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVFSEGLSGKLFGDKAYISKELF HQLLTNGIRLFTNLRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSLLNFFVHIIASLASYSISTLNPY LISSSFSSFNLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29435; Mature: 29435
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLQLAVLM CHHHHHHHHHHHHHHCCHHHHHHHEEHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHH HYLKGEETGIYYIDSTKLAICHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGE HHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC IMSVKITKGNKSDLSVASVFSEGLSGKLFGDKAYISKELFHQLLTNGIRLFTNLRKDMKT EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSLLNFFVHIIASLASYSISTLNPY HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LISSSFSSFNLS HEECCCCCCCCC >Mature Secondary Structure MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLQLAVLM CHHHHHHHHHHHHHHCCHHHHHHHEEHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHH HYLKGEETGIYYIDSTKLAICHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGE HHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC IMSVKITKGNKSDLSVASVFSEGLSGKLFGDKAYISKELFHQLLTNGIRLFTNLRKDMKT EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSLLNFFVHIIASLASYSISTLNPY HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LISSSFSSFNLS HEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA