Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183407

Identifier: 189183407

GI number: 189183407

Start: 516888

End: 517385

Strand: Reverse

Name: 189183407

Synonym: OTT_0500

Alternate gene names: NA

Gene position: 517385-516888 (Counterclockwise)

Preceding gene: 189183409

Following gene: 189183403

Centisome position: 25.75

GC content: 32.33

Gene sequence:

>498_bases
ATGAAATGTGATCAGATTAAAGAGTTAAAGGATGAAAAATTTCGTCGATTAACAGGAGTAAGGAAGATGACATTTTCAAA
GATGGTAGATATTTTGAGGAAAGCTGATGGTCTTAAGAAATCAAAATGTGGGCGTAAAAATAAGCTCAATTTGCAGGAAC
AGTTGCTGACAGTCTTAGAATACCTTAGAGAATACCGCACTTATTTCCATATAGGTCAGAACTATGGGATTAGTGAAAGT
TCAGCATATAAAGCTGTAAAATGGGTAGAAAACACCCTAGTTAAACACCAAAATTTTGCTCTTTCATGTCGTAAAGCTCT
AATGAAGAGTGATATGAATTATGAAGTAGTCTTGATTGATGCTACTGAGAGTCCTATAGAAAGACCTAAAAAAAACAACA
ATTCTATTTTATTCATGAAAGAAGAAAAGGCATATACTAAAAGCTCAAATAGTTGTAGACAAGAAAACATACCAAGTAAT
ATGTACAGATTTTTCTAA

Upstream 100 bases:

>100_bases
TAAAAATTATTAACAGAATTTCTGCAAAAGGATATTAGACTTCTTTCGAAACTAGAGAATGATGTAGAATAGTGTTATAA
AGATCTGATTTGAGGTAATA

Downstream 100 bases:

>100_bases
CGGTAAAAAGCATGACTTTAGATTATTTAAGGAATCCAAAATTCTTATCCATCCTAAGGTTAAAGCGATTACTGATACAG
GATATCAAGGTATACAAAAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKCDQIKELKDEKFRRLTGVRKMTFSKMVDILRKADGLKKSKCGRKNKLNLQEQLLTVLEYLREYRTYFHIGQNYGISES
SAYKAVKWVENTLVKHQNFALSCRKALMKSDMNYEVVLIDATESPIERPKKNNNSILFMKEEKAYTKSSNSCRQENIPSN
MYRFF

Sequences:

>Translated_165_residues
MKCDQIKELKDEKFRRLTGVRKMTFSKMVDILRKADGLKKSKCGRKNKLNLQEQLLTVLEYLREYRTYFHIGQNYGISES
SAYKAVKWVENTLVKHQNFALSCRKALMKSDMNYEVVLIDATESPIERPKKNNNSILFMKEEKAYTKSSNSCRQENIPSN
MYRFF
>Mature_165_residues
MKCDQIKELKDEKFRRLTGVRKMTFSKMVDILRKADGLKKSKCGRKNKLNLQEQLLTVLEYLREYRTYFHIGQNYGISES
SAYKAVKWVENTLVKHQNFALSCRKALMKSDMNYEVVLIDATESPIERPKKNNNSILFMKEEKAYTKSSNSCRQENIPSN
MYRFF

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 19500; Mature: 19500

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCDQIKELKDEKFRRLTGVRKMTFSKMVDILRKADGLKKSKCGRKNKLNLQEQLLTVLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHH
YLREYRTYFHIGQNYGISESSAYKAVKWVENTLVKHQNFALSCRKALMKSDMNYEVVLID
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEE
ATESPIERPKKNNNSILFMKEEKAYTKSSNSCRQENIPSNMYRFF
CCCCHHHCCCCCCCCEEEEECCHHHHCCCCCHHHHCCCHHHHHCC
>Mature Secondary Structure
MKCDQIKELKDEKFRRLTGVRKMTFSKMVDILRKADGLKKSKCGRKNKLNLQEQLLTVLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHH
YLREYRTYFHIGQNYGISESSAYKAVKWVENTLVKHQNFALSCRKALMKSDMNYEVVLID
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEE
ATESPIERPKKNNNSILFMKEEKAYTKSSNSCRQENIPSNMYRFF
CCCCHHHCCCCCCCCEEEEECCHHHHCCCCCHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]