| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183410
Identifier: 189183410
GI number: 189183410
Start: 521541
End: 521894
Strand: Reverse
Name: 189183410
Synonym: OTT_0503
Alternate gene names: NA
Gene position: 521894-521541 (Counterclockwise)
Preceding gene: 189183411
Following gene: 189183409
Centisome position: 25.98
GC content: 27.12
Gene sequence:
>354_bases ATGACATATTCTATAGATTTTCGAAAAAAAGTGCTGGACATAAAGGAAAGAGAGAAAATTAGTTTTGAAAAAGTATCAAA ACGTTTTGGGATAGAAAAGAATACAGTATTTGTATGGAGTAAAAACATATTGCCGTTAAAAAACAGAAACAGAGCTCCAA CAAAAATCTCTATTGATAAACTAAAAGAAGATGTATTACAATATAGTGATGCATATCAATATGAAAGTGCTGAACGGCTA GGAGTAAGTAAGTCAGGTATACAAAAAGCATTAAAGAGATTAAATATTACATATAAAAAAAGCTATAAAACATTCGAAGG AAAAAAAAGAAGAAAGATTAAAATTTCAGAATAA
Upstream 100 bases:
>100_bases AAATATAGTAGTAAATAGAAAGATAGTTCTTTTAATATTTATATAGCTAAACACTATAAAACAGTTATAATAAGTAAGAT GTAATGAAAAAATAATTAGT
Downstream 100 bases:
>100_bases GATAAAAAGGTACAAAAACATAGGAAAAGTTGTCATCTTTACAGATGAGAGCAGTTTTGTTCCTAGTGCACTTCTAGAAC TTACGTATATGCAGCAAGAT
Product: transposase
Products: NA
Alternate protein names: ISRin2 Transposase OrfA; ISHde5 Transposase OrfA; ISHde6 Transposase OrfA; ISHde1 Transposase OrfA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTYSIDFRKKVLDIKEREKISFEKVSKRFGIEKNTVFVWSKNILPLKNRNRAPTKISIDKLKEDVLQYSDAYQYESAERL GVSKSGIQKALKRLNITYKKSYKTFEGKKRRKIKISE
Sequences:
>Translated_117_residues MTYSIDFRKKVLDIKEREKISFEKVSKRFGIEKNTVFVWSKNILPLKNRNRAPTKISIDKLKEDVLQYSDAYQYESAERL GVSKSGIQKALKRLNITYKKSYKTFEGKKRRKIKISE >Mature_116_residues TYSIDFRKKVLDIKEREKISFEKVSKRFGIEKNTVFVWSKNILPLKNRNRAPTKISIDKLKEDVLQYSDAYQYESAERLG VSKSGIQKALKRLNITYKKSYKTFEGKKRRKIKISE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13883; Mature: 13752
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSIDFRKKVLDIKEREKISFEKVSKRFGIEKNTVFVWSKNILPLKNRNRAPTKISIDK CCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEHHH LKEDVLQYSDAYQYESAERLGVSKSGIQKALKRLNITYKKSYKTFEGKKRRKIKISE HHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEECC >Mature Secondary Structure TYSIDFRKKVLDIKEREKISFEKVSKRFGIEKNTVFVWSKNILPLKNRNRAPTKISIDK CCCCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEHHH LKEDVLQYSDAYQYESAERLGVSKSGIQKALKRLNITYKKSYKTFEGKKRRKIKISE HHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA