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The map label for this gene is gatC

Identifier: 189183275

GI number: 189183275

Start: 375327

End: 375626

Strand: Reverse

Name: gatC

Synonym: OTT_0368

Alternate gene names: 189183275

Gene position: 375626-375327 (Counterclockwise)

Preceding gene: 189183276

Following gene: 189183274

Centisome position: 18.7

GC content: 32.0

Gene sequence:

>300_bases
ATGATATCTATAAATGAAGTGCAATCAATTGCTAATTACTGCAAGTTGCGGTTTAATGAACAAGAACTAAATCATATGGT
TAAGCAACTATCCAGTATAGTGGAAATGATGAACAAGCTGGAAAAAATTGATTGTACATCTGTTCCACCTATGAGGCACT
TTGAAGAAAATAACAGAATGCGAAAAGATCAAGTTGAGCAGAATATTACAGTGGATCAGTTATTATCTAACGTACCACAG
TCATCAGCAACTATAGCTAAAAACACAAAATATTTTGTTGTACCAAAGATAATAGAATAA

Upstream 100 bases:

>100_bases
TATCAACAAAGAAATTAGCAAATAACGCGTAATTACTAACATTGACTTAGCTGAATTGTTCAGATATATTACCATTATTC
CATAGTATAATTAGTGAGTT

Downstream 100 bases:

>100_bases
TGAACAATCTAGTAAAATTAACAATTTCTCAAGCAATTAGCGGGCTAAAAAATAAAGAGTTTACTGCTACTGATCTAGTA
ACTGCACATATCAACCAAAT

Product: glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MISINEVQSIANYCKLRFNEQELNHMVKQLSSIVEMMNKLEKIDCTSVPPMRHFEENNRMRKDQVEQNITVDQLLSNVPQ
SSATIAKNTKYFVVPKIIE

Sequences:

>Translated_99_residues
MISINEVQSIANYCKLRFNEQELNHMVKQLSSIVEMMNKLEKIDCTSVPPMRHFEENNRMRKDQVEQNITVDQLLSNVPQ
SSATIAKNTKYFVVPKIIE
>Mature_99_residues
MISINEVQSIANYCKLRFNEQELNHMVKQLSSIVEMMNKLEKIDCTSVPPMRHFEENNRMRKDQVEQNITVDQLLSNVPQ
SSATIAKNTKYFVVPKIIE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_ORITI (B3CQR0)

Other databases:

- EMBL:   AP008981
- RefSeq:   YP_001937060.1
- GeneID:   6337821
- GenomeReviews:   AP008981_GR
- KEGG:   ott:OTT_0368
- HOGENOM:   HBG586403
- OMA:   ISINEVQ
- ProtClustDB:   CLSK2325808
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11542; Mature: 11542

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISINEVQSIANYCKLRFNEQELNHMVKQLSSIVEMMNKLEKIDCTSVPPMRHFEENNRM
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
RKDQVEQNITVDQLLSNVPQSSATIAKNTKYFVVPKIIE
CHHHHHHCCCHHHHHHHCCCCCCHHHCCCCEEECCCCCC
>Mature Secondary Structure
MISINEVQSIANYCKLRFNEQELNHMVKQLSSIVEMMNKLEKIDCTSVPPMRHFEENNRM
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
RKDQVEQNITVDQLLSNVPQSSATIAKNTKYFVVPKIIE
CHHHHHHCCCHHHHHHHCCCCCCHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA