| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189182985
Identifier: 189182985
GI number: 189182985
Start: 81219
End: 83075
Strand: Direct
Name: 189182985
Synonym: OTT_0078
Alternate gene names: NA
Gene position: 81219-83075 (Clockwise)
Preceding gene: 189182984
Following gene: 189182986
Centisome position: 4.04
GC content: 28.49
Gene sequence:
>1857_bases ATGTTAGTTAAAAGCAAATTAATATGTTTAATTACTATTTTATTATTAAATTTAATAGCTGCAAGTAGTGCTACTGCATC TAACTCAATCACTACTCTCCCTGCCCTTCCAGCAATATCTTTGCCTAGTGATACCAATAATCCAGACTTAAGTAATAGCA TGAATAATAGCTGGTGGAATAAAATAAAATCTTTTTTTGGTTTTAATGTTGAAAGTGAGCAAAATAAATTAGAAGCTAAT AACGTACAAAATATTGAAAATAGTTTTAATAATGATTTTCCAATAAATAACGAAAAACTAGAAAGCAATCAATTGAATAC AAAATCGCATAATTTTATTACACTTGATAACAATAGCTTACCTAGATTACACGATGATGATAATACTGATATCGAACTTG CAGAGTTACCAGACATACTCAAAGCTACTCAAATGCAAGATAATAATAATATGCAAACAAAATTAAATATTAATCAAACA CAAGAACTATACTCTCAAATTAATAGAGATGATTCTCAAAAACAAGATTATACCTCATCAAGTCAAGGTTACCAAACTCA AATCATTAAATCTCATAAACCTAAAATTAACAATACTAATCTGACTGCTTTACTAAAGTTGCCTGTACCCACTCAATCGT TAAGAGAGCAACATCATAATATGCAATCTACTACTCAAGATTTTTCAAACAAATACGAAGTTATTAATAGTCTTAACCAA CTAGAAAATACTCAAAGTAAGTTAGAGCAGCAAACCCAAACTACTAATCAAGATAGTAAAGTTTCATTAAGCCTTAATTT TGAAGAATACACAGAAAAAAATATTGATACCTCAAACTCTTTATCATCGATAAGCAATCAACAAGAAACTATTAACAGTG AAAAAACTTTAAAACAGCAACCTGACCTACCATTAACAACAACATTAAATGAAAATAATGCTGATAATAATAATTCTAGC AATACAGAACCTAATTCAGATATTACTGATATTGATTTAACTCATAATCCTGATAAAAATTCTATTCCACTTGTTGATAA TTATGCTAATCAAGCATTAAGTAATGATACTAGTTCTACTAACAATGATACTGATGATACTGATGATACTGATGATACTG ATGATACTACGTCTACTTCTATCTTAGCTTCTAACACTAACAGTGATGCTATTCAATTACCAACTAACGATAACTCTAGC ACTGCTAATACTGATAATATTTCTACTATATTAAAAACAGATGATGCTGACATCAATAACATTAACTTAGATATTCAAGA TAACAATCAAGATATCGAAACTTCCATGATTTCTGAATTAGAAAATCATGAAACAAATATAAATACATCTGATGTTAATG AATTCACTATAAATACCAACCATGATACCAATAACAACTCACAAAACGAAAGTTCAGAGAAACAAGCTGAACCATCGTCA ACATCAATACAAACTACAGATTCTAATCAATCCAATACAGATAATTCTACTCAGCACAATGATTATGATACGACAAGCTC TAACGCTAACGCTGAATCAGAAATAGATACTACGAAAACTAAAATTGATATTAAACCTAGAGATAGTGTTGAGTTAAGTA TGTTTCTTGATCGTGAATTAATAATATTAACAGCAGAAAATGATGATATTGAGTTAGGACAACTTACTGACAAAGCTAAA TTAAAGTTAATAGATGATTGGAAGTATATCAAGCTAATCGAAAAGGAAATAAATTACAGAAAAGAAGCAAGCAAAAGACA AGCAGTTAATAATATAATTCAGTACCATCGTATGAAAACAAAAAAAATGCAAGATTTAACTCAAAAAGATACCTATATAT CTAAATGCTATAAGTGA
Upstream 100 bases:
>100_bases CTATCTGATTTAGTAAAATCTATTATTGAACCTATTGTTGCCAAAGAAGTAATGCAGCAATTATCTAAGACTAATCAATC AAACAAGCAAAGAAATTAAA
Downstream 100 bases:
>100_bases TAATGATATACCTTGTCACTTTTATATAAAAAAATAAATTACAAATAATGCTTAATACCAGCAGCTTTTTTCATGCTAAT ATACTTTCTTTATTTCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MLVKSKLICLITILLLNLIAASSATASNSITTLPALPAISLPSDTNNPDLSNSMNNSWWNKIKSFFGFNVESEQNKLEAN NVQNIENSFNNDFPINNEKLESNQLNTKSHNFITLDNNSLPRLHDDDNTDIELAELPDILKATQMQDNNNMQTKLNINQT QELYSQINRDDSQKQDYTSSSQGYQTQIIKSHKPKINNTNLTALLKLPVPTQSLREQHHNMQSTTQDFSNKYEVINSLNQ LENTQSKLEQQTQTTNQDSKVSLSLNFEEYTEKNIDTSNSLSSISNQQETINSEKTLKQQPDLPLTTTLNENNADNNNSS NTEPNSDITDIDLTHNPDKNSIPLVDNYANQALSNDTSSTNNDTDDTDDTDDTDDTTSTSILASNTNSDAIQLPTNDNSS TANTDNISTILKTDDADINNINLDIQDNNQDIETSMISELENHETNINTSDVNEFTINTNHDTNNNSQNESSEKQAEPSS TSIQTTDSNQSNTDNSTQHNDYDTTSSNANAESEIDTTKTKIDIKPRDSVELSMFLDRELIILTAENDDIELGQLTDKAK LKLIDDWKYIKLIEKEINYRKEASKRQAVNNIIQYHRMKTKKMQDLTQKDTYISKCYK
Sequences:
>Translated_618_residues MLVKSKLICLITILLLNLIAASSATASNSITTLPALPAISLPSDTNNPDLSNSMNNSWWNKIKSFFGFNVESEQNKLEAN NVQNIENSFNNDFPINNEKLESNQLNTKSHNFITLDNNSLPRLHDDDNTDIELAELPDILKATQMQDNNNMQTKLNINQT QELYSQINRDDSQKQDYTSSSQGYQTQIIKSHKPKINNTNLTALLKLPVPTQSLREQHHNMQSTTQDFSNKYEVINSLNQ LENTQSKLEQQTQTTNQDSKVSLSLNFEEYTEKNIDTSNSLSSISNQQETINSEKTLKQQPDLPLTTTLNENNADNNNSS NTEPNSDITDIDLTHNPDKNSIPLVDNYANQALSNDTSSTNNDTDDTDDTDDTDDTTSTSILASNTNSDAIQLPTNDNSS TANTDNISTILKTDDADINNINLDIQDNNQDIETSMISELENHETNINTSDVNEFTINTNHDTNNNSQNESSEKQAEPSS TSIQTTDSNQSNTDNSTQHNDYDTTSSNANAESEIDTTKTKIDIKPRDSVELSMFLDRELIILTAENDDIELGQLTDKAK LKLIDDWKYIKLIEKEINYRKEASKRQAVNNIIQYHRMKTKKMQDLTQKDTYISKCYK >Mature_618_residues MLVKSKLICLITILLLNLIAASSATASNSITTLPALPAISLPSDTNNPDLSNSMNNSWWNKIKSFFGFNVESEQNKLEAN NVQNIENSFNNDFPINNEKLESNQLNTKSHNFITLDNNSLPRLHDDDNTDIELAELPDILKATQMQDNNNMQTKLNINQT QELYSQINRDDSQKQDYTSSSQGYQTQIIKSHKPKINNTNLTALLKLPVPTQSLREQHHNMQSTTQDFSNKYEVINSLNQ LENTQSKLEQQTQTTNQDSKVSLSLNFEEYTEKNIDTSNSLSSISNQQETINSEKTLKQQPDLPLTTTLNENNADNNNSS NTEPNSDITDIDLTHNPDKNSIPLVDNYANQALSNDTSSTNNDTDDTDDTDDTDDTTSTSILASNTNSDAIQLPTNDNSS TANTDNISTILKTDDADINNINLDIQDNNQDIETSMISELENHETNINTSDVNEFTINTNHDTNNNSQNESSEKQAEPSS TSIQTTDSNQSNTDNSTQHNDYDTTSSNANAESEIDTTKTKIDIKPRDSVELSMFLDRELIILTAENDDIELGQLTDKAK LKLIDDWKYIKLIEKEINYRKEASKRQAVNNIIQYHRMKTKKMQDLTQKDTYISKCYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69629; Mature: 69629
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVKSKLICLITILLLNLIAASSATASNSITTLPALPAISLPSDTNNPDLSNSMNNSWWN CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCHHHHH KIKSFFGFNVESEQNKLEANNVQNIENSFNNDFPINNEKLESNQLNTKSHNFITLDNNSL HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC PRLHDDDNTDIELAELPDILKATQMQDNNNMQTKLNINQTQELYSQINRDDSQKQDYTSS CCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCHHHCCCCC SQGYQTQIIKSHKPKINNTNLTALLKLPVPTQSLREQHHNMQSTTQDFSNKYEVINSLNQ CCCCHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LENTQSKLEQQTQTTNQDSKVSLSLNFEEYTEKNIDTSNSLSSISNQQETINSEKTLKQQ HHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHC PDLPLTTTLNENNADNNNSSNTEPNSDITDIDLTHNPDKNSIPLVDNYANQALSNDTSST CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCC NNDTDDTDDTDDTDDTTSTSILASNTNSDAIQLPTNDNSSTANTDNISTILKTDDADINN CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCE INLDIQDNNQDIETSMISELENHETNINTSDVNEFTINTNHDTNNNSQNESSEKQAEPSS EEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCC TSIQTTDSNQSNTDNSTQHNDYDTTSSNANAESEIDTTKTKIDIKPRDSVELSMFLDREL CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEE IILTAENDDIELGQLTDKAKLKLIDDWKYIKLIEKEINYRKEASKRQAVNNIIQYHRMKT EEEEECCCCEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKMQDLTQKDTYISKCYK HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLVKSKLICLITILLLNLIAASSATASNSITTLPALPAISLPSDTNNPDLSNSMNNSWWN CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCHHHHH KIKSFFGFNVESEQNKLEANNVQNIENSFNNDFPINNEKLESNQLNTKSHNFITLDNNSL HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC PRLHDDDNTDIELAELPDILKATQMQDNNNMQTKLNINQTQELYSQINRDDSQKQDYTSS CCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCHHHCCCCC SQGYQTQIIKSHKPKINNTNLTALLKLPVPTQSLREQHHNMQSTTQDFSNKYEVINSLNQ CCCCHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LENTQSKLEQQTQTTNQDSKVSLSLNFEEYTEKNIDTSNSLSSISNQQETINSEKTLKQQ HHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHC PDLPLTTTLNENNADNNNSSNTEPNSDITDIDLTHNPDKNSIPLVDNYANQALSNDTSST CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCC NNDTDDTDDTDDTDDTTSTSILASNTNSDAIQLPTNDNSSTANTDNISTILKTDDADINN CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCE INLDIQDNNQDIETSMISELENHETNINTSDVNEFTINTNHDTNNNSQNESSEKQAEPSS EEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCC TSIQTTDSNQSNTDNSTQHNDYDTTSSNANAESEIDTTKTKIDIKPRDSVELSMFLDREL CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEE IILTAENDDIELGQLTDKAKLKLIDDWKYIKLIEKEINYRKEASKRQAVNNIIQYHRMKT EEEEECCCCEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKMQDLTQKDTYISKCYK HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA