| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189182984
Identifier: 189182984
GI number: 189182984
Start: 80645
End: 81217
Strand: Direct
Name: 189182984
Synonym: OTT_0077
Alternate gene names: NA
Gene position: 80645-81217 (Clockwise)
Preceding gene: 189182983
Following gene: 189182985
Centisome position: 4.01
GC content: 25.31
Gene sequence:
>573_bases ATGTTTATGACTAAACTCCATAAAGAAAATGAAGATTATAATGAACATACTAATCAGTCAATTGAAGAAATTTTAAACTC TATTAAAAATACAATTAATTATGATATAGTTAATACCGATTCTTTAAACAACAACAATGCAATAGATAATAATGAAGATG ATGATGATATTTTGATATTAACTGAGATAATCAGTATACCTAATCAAAATAAGCAAGTTAATATTAATACATCTCAACTT AGTAGTAGTAATATAGTTAAAAGCCACCTACCTAATATCACTGCAGATGTAGTTAATTTAATTCCTGAATCTACTTCTAC TAAAATTGAATCAAAAGAACAAAAATCACCAAAGAAAGTACATAACAATATTAATAAGCAGAATCAAAATACTTCTATCT GTAGCAATCAAACTATAGAAGATATAGTAATAGAATTACTAAAGCCAAAACTATCTGAATGGCTTGATAATCACCTATCT GATTTAGTAAAATCTATTATTGAACCTATTGTTGCCAAAGAAGTAATGCAGCAATTATCTAAGACTAATCAATCAAACAA GCAAAGAAATTAA
Upstream 100 bases:
>100_bases TAAAGGTGAATTACTTTATTCCAGAGCAAAAGCAGAAATTTAAAAAAACACTTTAAACTACTCTTTAAGTTTAATAAAAT TCTAAAGTAGCAAGAGGAGA
Downstream 100 bases:
>100_bases AATGTTAGTTAAAAGCAAATTAATATGTTTAATTACTATTTTATTATTAAATTTAATAGCTGCAAGTAGTGCTACTGCAT CTAACTCAATCACTACTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MFMTKLHKENEDYNEHTNQSIEEILNSIKNTINYDIVNTDSLNNNNAIDNNEDDDDILILTEIISIPNQNKQVNINTSQL SSSNIVKSHLPNITADVVNLIPESTSTKIESKEQKSPKKVHNNINKQNQNTSICSNQTIEDIVIELLKPKLSEWLDNHLS DLVKSIIEPIVAKEVMQQLSKTNQSNKQRN
Sequences:
>Translated_190_residues MFMTKLHKENEDYNEHTNQSIEEILNSIKNTINYDIVNTDSLNNNNAIDNNEDDDDILILTEIISIPNQNKQVNINTSQL SSSNIVKSHLPNITADVVNLIPESTSTKIESKEQKSPKKVHNNINKQNQNTSICSNQTIEDIVIELLKPKLSEWLDNHLS DLVKSIIEPIVAKEVMQQLSKTNQSNKQRN >Mature_190_residues MFMTKLHKENEDYNEHTNQSIEEILNSIKNTINYDIVNTDSLNNNNAIDNNEDDDDILILTEIISIPNQNKQVNINTSQL SSSNIVKSHLPNITADVVNLIPESTSTKIESKEQKSPKKVHNNINKQNQNTSICSNQTIEDIVIELLKPKLSEWLDNHLS DLVKSIIEPIVAKEVMQQLSKTNQSNKQRN
Specific function: Unknown
COG id: COG3827
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21629; Mature: 21629
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMTKLHKENEDYNEHTNQSIEEILNSIKNTINYDIVNTDSLNNNNAIDNNEDDDDILIL CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH TEIISIPNQNKQVNINTSQLSSSNIVKSHLPNITADVVNLIPESTSTKIESKEQKSPKKV HHHHHCCCCCCEEECCHHHHCHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHH HNNINKQNQNTSICSNQTIEDIVIELLKPKLSEWLDNHLSDLVKSIIEPIVAKEVMQQLS HHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTNQSNKQRN HHCCCCCCCC >Mature Secondary Structure MFMTKLHKENEDYNEHTNQSIEEILNSIKNTINYDIVNTDSLNNNNAIDNNEDDDDILIL CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH TEIISIPNQNKQVNINTSQLSSSNIVKSHLPNITADVVNLIPESTSTKIESKEQKSPKKV HHHHHCCCCCCEEECCHHHHCHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCHHHH HNNINKQNQNTSICSNQTIEDIVIELLKPKLSEWLDNHLSDLVKSIIEPIVAKEVMQQLS HHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTNQSNKQRN HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA