Click here to switch to the map view.

The map label for this gene is 189026009

Identifier: 189026009

GI number: 189026009

Start: 852127

End: 852726

Strand: Direct

Name: 189026009

Synonym: TPASS_0784

Alternate gene names: NA

Gene position: 852127-852726 (Clockwise)

Preceding gene: 189026000

Following gene: 189026010

Centisome position: 74.78

GC content: 54.83

Gene sequence:

>600_bases
GTGCGCATTCGACTCCTCTTTGCTCCTGTCTCCTGCCTCCTTCTGGTTTGCTGCGCCGACAGCAGTGCCTTACGCTGGAT
ACAGCAACCCTCCGCCACGCGCAACACACCTACCATCGCGTTTTTCCAAGTGACGTTCGATCGCTACAACACTCACCTGT
TGGAAACGCGCCTGCATGCTCAAACGCTTGAGTTCTATCACCACGACCAAACCTGGACTGCACGGGACATCCACTTTACA
CGCTACGACGGCAATGGGCGTGCGAGCGTGCGCGGGCATGCAGGTGTTTTGCTCACTGACTGCGAAGGTACTGTTTTCTA
CCTCGGGAAAAAGGTGGACTGCTTCTTTCCCCATGAGGGTCTGCGTTTGGAAGGACGCGCATTTCGATGGGAAAATACGC
GAGCATTGTTCACAAGCGATCACTTCTCCCCTGTTCGCATCAGCGATGCATCAGGGGCTGTTGTCACCGGGGTTGGTTTA
TGCGTCAATGCACGCACCAAACGCTTTGTGTTTCAAAATGGCGTTCACATAGACGTCGATCTTGACTCTTTCGCCAAAAC
CCGCGCGTCACGGTACGCCGCACCGAATCTCAGTCCATGA

Upstream 100 bases:

>100_bases
AAGGTGCGTCCTTCTTTCCTACTTGGGACGCGTTGTCTGTCCTTCTTTTTCTGCCCGGGCATCTGTCCGGCTACGCCCGT
TGTAGCGTAAAGGAGCGGTA

Downstream 100 bases:

>100_bases
CTCGCGCGTCCTCATACCCTGCTTTTTCACCCGTACCCTTCTTGCGCACTGTACTCCTTGCACTTTTTCTCATGTCCCTG
TGCGTGTGGCAACGCGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRIRLLFAPVSCLLLVCCADSSALRWIQQPSATRNTPTIAFFQVTFDRYNTHLLETRLHAQTLEFYHHDQTWTARDIHFT
RYDGNGRASVRGHAGVLLTDCEGTVFYLGKKVDCFFPHEGLRLEGRAFRWENTRALFTSDHFSPVRISDASGAVVTGVGL
CVNARTKRFVFQNGVHIDVDLDSFAKTRASRYAAPNLSP

Sequences:

>Translated_199_residues
MRIRLLFAPVSCLLLVCCADSSALRWIQQPSATRNTPTIAFFQVTFDRYNTHLLETRLHAQTLEFYHHDQTWTARDIHFT
RYDGNGRASVRGHAGVLLTDCEGTVFYLGKKVDCFFPHEGLRLEGRAFRWENTRALFTSDHFSPVRISDASGAVVTGVGL
CVNARTKRFVFQNGVHIDVDLDSFAKTRASRYAAPNLSP
>Mature_199_residues
MRIRLLFAPVSCLLLVCCADSSALRWIQQPSATRNTPTIAFFQVTFDRYNTHLLETRLHAQTLEFYHHDQTWTARDIHFT
RYDGNGRASVRGHAGVLLTDCEGTVFYLGKKVDCFFPHEGLRLEGRAFRWENTRALFTSDHFSPVRISDASGAVVTGVGL
CVNARTKRFVFQNGVHIDVDLDSFAKTRASRYAAPNLSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y784_TREPA (O83763)

Other databases:

- EMBL:   AE000520
- PIR:   A71283
- RefSeq:   NP_219221.1
- ProteinModelPortal:   O83763
- IntAct:   O83763
- GeneID:   2611209
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0784
- NMPDR:   fig|243276.1.peg.780
- TIGR:   TP_0784
- HOGENOM:   HBG732106
- OMA:   RINFMEL
- ProtClustDB:   CLSK218867
- BioCyc:   TPAL243276:TP_0784-MONOMER
- InterPro:   IPR010664

Pfam domain/function: PF06835 DUF1239

EC number: NA

Molecular weight: Translated: 22512; Mature: 22512

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRLLFAPVSCLLLVCCADSSALRWIQQPSATRNTPTIAFFQVTFDRYNTHLLETRLHA
CEEEEEECCHHHEEEEECCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHH
QTLEFYHHDQTWTARDIHFTRYDGNGRASVRGHAGVLLTDCEGTVFYLGKKVDCFFPHEG
HHEEEEECCCCEEEEEEEEEEECCCCCEEEECCCCEEEECCCCEEEEECCEEEEEECCCC
LRLEGRAFRWENTRALFTSDHFSPVRISDASGAVVTGVGLCVNARTKRFVFQNGVHIDVD
CEECCEEEEECCCEEEEECCCCCCEEEECCCCEEEEEEEEEEECCCEEEEEECCCEEEEE
LDSFAKTRASRYAAPNLSP
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRIRLLFAPVSCLLLVCCADSSALRWIQQPSATRNTPTIAFFQVTFDRYNTHLLETRLHA
CEEEEEECCHHHEEEEECCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHH
QTLEFYHHDQTWTARDIHFTRYDGNGRASVRGHAGVLLTDCEGTVFYLGKKVDCFFPHEG
HHEEEEECCCCEEEEEEEEEEECCCCCEEEECCCCEEEECCCCEEEEECCEEEEEECCCC
LRLEGRAFRWENTRALFTSDHFSPVRISDASGAVVTGVGLCVNARTKRFVFQNGVHIDVD
CEECCEEEEECCCEEEEECCCCCCEEEECCCCEEEEEEEEEEECCCEEEEEECCCEEEEE
LDSFAKTRASRYAAPNLSP
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876