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The map label for this gene is fliQ

Identifier: 189025942

GI number: 189025942

Start: 787030

End: 787314

Strand: Reverse

Name: fliQ

Synonym: TPASS_0717

Alternate gene names: 189025942

Gene position: 787314-787030 (Counterclockwise)

Preceding gene: 189025943

Following gene: 189025941

Centisome position: 69.1

GC content: 47.72

Gene sequence:

>285_bases
GTGATGACGCAAGGTGCGGTATTAGGCTTGATACGAGAGGGTGTTTTTCAGGTGGTGTTACTTGTCGCGCCTGTTCTGTG
CACAGCGCTTGTCGTTGGCTTAATAGTGGCTATCTTTCAGGCAGTGACGTCTATTCAGGAACAAACACTTACCTTTGTTC
CTAAGATGTTGACCATATTGGGAATGATTGCCCTCCTCGGTGGGTGGATGCTGACAATGCTGCAGAATTATACCGTAAGG
CTGTTTGACATTATCCCTCAGTTAGTGAGGAGTGGACCTGTCTAG

Upstream 100 bases:

>100_bases
ATTGCCGTTTAAATTGGTTTTGTTCGTGCTGGTGGACGGTTGGAATCTGCTGATAGATAGGCTTTTTCATTCGTTTTTAT
AACATACAGGACGGGAGTGT

Downstream 100 bases:

>100_bases
TGGATATGTGCGATGGAACGGTCCTTTGATGCACTCTTTTCTCAGGCTTCTCTTTTTTTTCTTGCGGCGGTCCGCGTGTT
TGCGCTTATGTTTACGGTAC

Product: flagellar biosynthetic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MMTQGAVLGLIREGVFQVVLLVAPVLCTALVVGLIVAIFQAVTSIQEQTLTFVPKMLTILGMIALLGGWMLTMLQNYTVR
LFDIIPQLVRSGPV

Sequences:

>Translated_94_residues
MMTQGAVLGLIREGVFQVVLLVAPVLCTALVVGLIVAIFQAVTSIQEQTLTFVPKMLTILGMIALLGGWMLTMLQNYTVR
LFDIIPQLVRSGPV
>Mature_94_residues
MMTQGAVLGLIREGVFQVVLLVAPVLCTALVVGLIVAIFQAVTSIQEQTLTFVPKMLTILGMIALLGGWMLTMLQNYTVR
LFDIIPQLVRSGPV

Specific function: Role in flagellar biosynthesis

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIQ_TREPA (P74931)

Other databases:

- EMBL:   U36839
- EMBL:   AE000520
- PIR:   JC4508
- RefSeq:   NP_219154.1
- ProteinModelPortal:   P74931
- IntAct:   P74931
- MINT:   MINT-6480207
- GeneID:   2610995
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0717
- NMPDR:   fig|243276.1.peg.713
- TIGR:   TP_0717
- HOGENOM:   HBG729002
- OMA:   INEMTLT
- ProtClustDB:   CLSK218829
- BioCyc:   TPAL243276:TP_0717-MONOMER
- InterPro:   IPR002191
- InterPro:   IPR006305
- PRINTS:   PR00952
- TIGRFAMs:   TIGR01402

Pfam domain/function: PF01313 Bac_export_3

EC number: NA

Molecular weight: Translated: 10186; Mature: 10186

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x21450dac)-; HASH(0x20c7d080)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTQGAVLGLIREGVFQVVLLVAPVLCTALVVGLIVAIFQAVTSIQEQTLTFVPKMLTIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMIALLGGWMLTMLQNYTVRLFDIIPQLVRSGPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MMTQGAVLGLIREGVFQVVLLVAPVLCTALVVGLIVAIFQAVTSIQEQTLTFVPKMLTIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMIALLGGWMLTMLQNYTVRLFDIIPQLVRSGPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8529894; 9665876