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The map label for this gene is fliP

Identifier: 189025943

GI number: 189025943

Start: 787333

End: 788148

Strand: Reverse

Name: fliP

Synonym: TPASS_0718

Alternate gene names: 189025943

Gene position: 788148-787333 (Counterclockwise)

Preceding gene: 189025944

Following gene: 189025942

Centisome position: 69.17

GC content: 48.53

Gene sequence:

>816_bases
GTGATCCGTGCTCGTGCGTGCGTACGCCGCGCGCTCTTTTTCGTGTCATTGTTTTTCTTCCCGCTTTTTGCACAGGATGC
GCGCGGAGGTGTCGAGCGCGGCGTTACTGGTATCAATGCTGAGCGGCCGGCTTCACGCATTCCTTTCATCAATTTTGATA
TCCGGGAGCCCCAGACCAATCGGGAAGTGGCTTTTTCTGTGCAACTTCTCCTGTTGCTCACGCTCATTTCCCTTGCGCCG
AGTATCTTGCTTTTGATGACTGCCTTTCTGCGCTTGTCTATCGTCCTTGATTTTATCAAACGTGCATTGTCGCTGCAGCA
AGTGCCGCCCACACAGGTTTTACACGGCATAGCATTGTTTCTCGCCCTGTTTATCATGTGGCCGGTCTTTACTGAGATTT
ATGCCAAATCGTTTAAACCTCTTACCGATGGCCAGGTAGATATCCAGACTGCATATACGGAGGCAGAAAGACCGCTGCGT
GTCTTCATGTATCGTCAGATGGCGCATGACCCGTCTTCTGTGCGTCTTTGTATGTCCATGGCAAAGCTGCCTAAGCCAGA
TACACTTGCGGACGTGCCCACGTATGTCCTTATCCCTGCTTTTATCCTGCATGAGCTGACCGTAGCCTTTCAGATTGGTA
TCTTCCTGTACTTACCTTTCATAATTGTTGATATGGTTGTAGCGAGTATTTTGATGTCTATGGGTATGATTATGCTGCCG
CCGGTTCAGATTTCATTGCCGTTTAAATTGGTTTTGTTCGTGCTGGTGGACGGTTGGAATCTGCTGATAGATAGGCTTTT
TCATTCGTTTTTATAA

Upstream 100 bases:

>100_bases
GGAAGCCGTTAGTTGAGGCAGATTTTCTTGCAGATACGAGAAAGAAGTTGCGTCGCATCCCTCGTAATGATTCTGAAGAA
TCTGCTGCACAGGATGCTTT

Downstream 100 bases:

>100_bases
CATACAGGACGGGAGTGTGTGATGACGCAAGGTGCGGTATTAGGCTTGATACGAGAGGGTGTTTTTCAGGTGGTGTTACT
TGTCGCGCCTGTTCTGTGCA

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MIRARACVRRALFFVSLFFFPLFAQDARGGVERGVTGINAERPASRIPFINFDIREPQTNREVAFSVQLLLLLTLISLAP
SILLLMTAFLRLSIVLDFIKRALSLQQVPPTQVLHGIALFLALFIMWPVFTEIYAKSFKPLTDGQVDIQTAYTEAERPLR
VFMYRQMAHDPSSVRLCMSMAKLPKPDTLADVPTYVLIPAFILHELTVAFQIGIFLYLPFIIVDMVVASILMSMGMIMLP
PVQISLPFKLVLFVLVDGWNLLIDRLFHSFL

Sequences:

>Translated_271_residues
MIRARACVRRALFFVSLFFFPLFAQDARGGVERGVTGINAERPASRIPFINFDIREPQTNREVAFSVQLLLLLTLISLAP
SILLLMTAFLRLSIVLDFIKRALSLQQVPPTQVLHGIALFLALFIMWPVFTEIYAKSFKPLTDGQVDIQTAYTEAERPLR
VFMYRQMAHDPSSVRLCMSMAKLPKPDTLADVPTYVLIPAFILHELTVAFQIGIFLYLPFIIVDMVVASILMSMGMIMLP
PVQISLPFKLVLFVLVDGWNLLIDRLFHSFL
>Mature_271_residues
MIRARACVRRALFFVSLFFFPLFAQDARGGVERGVTGINAERPASRIPFINFDIREPQTNREVAFSVQLLLLLTLISLAP
SILLLMTAFLRLSIVLDFIKRALSLQQVPPTQVLHGIALFLALFIMWPVFTEIYAKSFKPLTDGQVDIQTAYTEAERPLR
VFMYRQMAHDPSSVRLCMSMAKLPKPDTLADVPTYVLIPAFILHELTVAFQIGIFLYLPFIIVDMVVASILMSMGMIMLP
PVQISLPFKLVLFVLVDGWNLLIDRLFHSFL

Specific function: Plays a role in the flagellum-specific transport system

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family

Homologues:

Organism=Escherichia coli, GI1788259, Length=214, Percent_Identity=42.5233644859813, Blast_Score=177, Evalue=6e-46,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIP_TREPA (P74930)

Other databases:

- EMBL:   U36839
- EMBL:   AE000520
- PIR:   JC4507
- RefSeq:   NP_219155.1
- ProteinModelPortal:   P74930
- GeneID:   2611001
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0718
- NMPDR:   fig|243276.1.peg.714
- TIGR:   TP_0718
- HOGENOM:   HBG414116
- OMA:   MMTGFTR
- ProtClustDB:   PRK05699
- BioCyc:   TPAL243276:TP_0718-MONOMER
- InterPro:   IPR005837
- InterPro:   IPR005838
- PRINTS:   PR00951
- PRINTS:   PR01302
- TIGRFAMs:   TIGR01103

Pfam domain/function: PF00813 FliP

EC number: NA

Molecular weight: Translated: 30734; Mature: 30734

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS01060 FLIP_1; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x216fc398)-; HASH(0x217a9dac)-; HASH(0x21375fc8)-; HASH(0x20f8b4a8)-; HASH(0x21067a3c)-; HASH(0x214e1ca8)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRARACVRRALFFVSLFFFPLFAQDARGGVERGVTGINAERPASRIPFINFDIREPQTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCC
REVAFSVQLLLLLTLISLAPSILLLMTAFLRLSIVLDFIKRALSLQQVPPTQVLHGIALF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LALFIMWPVFTEIYAKSFKPLTDGQVDIQTAYTEAERPLRVFMYRQMAHDPSSVRLCMSM
HHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AKLPKPDTLADVPTYVLIPAFILHELTVAFQIGIFLYLPFIIVDMVVASILMSMGMIMLP
HHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
PVQISLPFKLVLFVLVDGWNLLIDRLFHSFL
CCEECCHHHHHHHHHHCCHHHHHHHHHHHHH
>Mature Secondary Structure
MIRARACVRRALFFVSLFFFPLFAQDARGGVERGVTGINAERPASRIPFINFDIREPQTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCC
REVAFSVQLLLLLTLISLAPSILLLMTAFLRLSIVLDFIKRALSLQQVPPTQVLHGIALF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LALFIMWPVFTEIYAKSFKPLTDGQVDIQTAYTEAERPLRVFMYRQMAHDPSSVRLCMSM
HHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AKLPKPDTLADVPTYVLIPAFILHELTVAFQIGIFLYLPFIIVDMVVASILMSMGMIMLP
HHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
PVQISLPFKLVLFVLVDGWNLLIDRLFHSFL
CCEECCHHHHHHHHHHCCHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8529894; 9665876