| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is pfkA [H]
Identifier: 189025770
GI number: 189025770
Start: 584577
End: 586298
Strand: Reverse
Name: pfkA [H]
Synonym: TPASS_0542
Alternate gene names: 189025770
Gene position: 586298-584577 (Counterclockwise)
Preceding gene: 189025771
Following gene: 189025766
Centisome position: 51.45
GC content: 53.08
Gene sequence:
>1722_bases ATGAGTATTTCTCTCTTGCAACAGGAACGGCATCGCTACCTGCCAAAGGTCCCCGATCTTCTTCGGGGGGACTTTCGGCG CGTTTGTGCGCGTCGCGGCTTATCCACCACTGCGGTGGCAGACTATGACGCGTTGCGCTCTCTTTTTGCGCGGACCTACG GTCAGCCGCTGGTGAACTTCGTTAATGCTAGTGAGAAAAACGAAGATTCCCCCATGGAGACTGCACCTGAGCCGCGAGGA TTACGTGTTGCCATAGTACTCTCAGGGGGTCAGGCACCAGGTGGTCACAACGTTATAGCAGGGCTTTTCGACGGATTAAA ACGATGGCACGCTGACTCTGTCCTTATCGGTTTTCTAGGCGGTCCTGCGGGCGTGCTTTCTGGCGATCATATCGAGATAT GCGCAGACCGTGTAGATGCGTACCGCAACACAGGTGGCTTTGACCTCATTGGTTCAGGACGCACCAAAATCGAAAGTGAG TCCCAGTTTGCCGCCGCGGCGCAGACAGTCACGCGTATGGCGCTTGATGCACTCGTAGTTGTAGGAGGTGATGACTCCAA CACGAACGCTGCCCTTTTGGCAGAACACTTCGTAAACAGTGGTATTTCTACCAAGGTTATCGGTGTTCCCAAAACTATTG ACGGAGACTTGAAAAATGAGGCGATAGAAACCTCGTTTGGTTTTGACACTGCCACAAAAACATACAGTGAACTTATCGGG AACATTGCGCGCGATGCGTGCAGTGCCCGCAAGTACTGGCATTTTATTAAGCTCATGGGGCGTTCAGCCAGTCATATTGC GCTTGAGTGCGCGCTGAAAACACAGCCAAATGTCTGTCTCATTTCGGAAGAAGTAGCGGCGCAATCGTTAACGCTCGCAC AGATCGTGCAGTCGTTGTGTGACACCATCGCCACGCGCGCACAACACGGTGAGCACTTTGGTATAGTGTTAGTTCCAGAA GGACTTATCGAATTTATACCTGAAATGAAGGCTCTAATTACGGAGCTCAACGAGGTGATGGCACGCCGCGCGCAGGAATT TGAGGCGCTGGACACTCCTGACGCGCAGCGCGTTTGGATAGAGCAGGCGTTGTCTGCTTCTGCTCGTGCGGTGTTTAACG CATTACCTGCTGAAATTTCCACACAGCTTTTGGCAGATCGGGATCCACATGGGAATGTGCAGGTGTCGCGCATTGACACA GAGCGTTTGCTCATTCTCCAGGTAACGGAGCGCTTAGCGCAGATGAAGCAGGAAGGTACGTACACCGGTGTTTTTTCCAG CATTGCTCATTTTTTTGGTTACGAAGGGCGATGCGCTTTTCCGTCCAACTTTGATGCAGATTATTGCTATACGCTCGGTT TGACCGCGTGTCTTCTGGCCGTGCACAGGTTTACAGGGTACGTAGCGTCGGTGCGTAACTTGACGTCTTCTGTAGCTGAG TGGGCAGTAGGTGGCGTGCCGCTTACTATGCTCATGAACATGGAGCGCCGACATGGAAGTCAAAAGCCGGTGATAAAAAA GGCGCTGGTTGACCTGGAGGGCATGCCGTTTCGGGTGTTCTCTCGTCGGCGTGCGAGTTGGGCCTTAAAAACAAGCTACG TGTATCCGGGGGCGGTACAGTATTATGGACCTCCGGCTGTGTGTGACGAACCTTCAGTAACTATACGCCTTGAGCGGCCC GCCCCTGCGGCGAATTCCTCATTTGGGCACCGGTCATCCTAG
Upstream 100 bases:
>100_bases GTATTGCGCATCCACACGCGGTCGCGCCTGCTGCAGAGTGAGTTGTGGGGGTGCGGCGGTGCGGTCGTGCTATTTTTCGT ATATGAAGGAGTAATCATCG
Downstream 100 bases:
>100_bases TACAGAAGGGAGCTGAGTGTGTGGTCGCGTTGTCTCCAGCTGCGGTCTACCTTCACTCGTATATCAAGGGAAATATGGTA GGGGAGGAGTGTGCGTAGCG
Product: diphosphate--fructose-6-phosphate 1-phosphotransferase
Products: NA
Alternate protein names: Phosphofructokinase; Phosphohexokinase [H]
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MSISLLQQERHRYLPKVPDLLRGDFRRVCARRGLSTTAVADYDALRSLFARTYGQPLVNFVNASEKNEDSPMETAPEPRG LRVAIVLSGGQAPGGHNVIAGLFDGLKRWHADSVLIGFLGGPAGVLSGDHIEICADRVDAYRNTGGFDLIGSGRTKIESE SQFAAAAQTVTRMALDALVVVGGDDSNTNAALLAEHFVNSGISTKVIGVPKTIDGDLKNEAIETSFGFDTATKTYSELIG NIARDACSARKYWHFIKLMGRSASHIALECALKTQPNVCLISEEVAAQSLTLAQIVQSLCDTIATRAQHGEHFGIVLVPE GLIEFIPEMKALITELNEVMARRAQEFEALDTPDAQRVWIEQALSASARAVFNALPAEISTQLLADRDPHGNVQVSRIDT ERLLILQVTERLAQMKQEGTYTGVFSSIAHFFGYEGRCAFPSNFDADYCYTLGLTACLLAVHRFTGYVASVRNLTSSVAE WAVGGVPLTMLMNMERRHGSQKPVIKKALVDLEGMPFRVFSRRRASWALKTSYVYPGAVQYYGPPAVCDEPSVTIRLERP APAANSSFGHRSS
Sequences:
>Translated_573_residues MSISLLQQERHRYLPKVPDLLRGDFRRVCARRGLSTTAVADYDALRSLFARTYGQPLVNFVNASEKNEDSPMETAPEPRG LRVAIVLSGGQAPGGHNVIAGLFDGLKRWHADSVLIGFLGGPAGVLSGDHIEICADRVDAYRNTGGFDLIGSGRTKIESE SQFAAAAQTVTRMALDALVVVGGDDSNTNAALLAEHFVNSGISTKVIGVPKTIDGDLKNEAIETSFGFDTATKTYSELIG NIARDACSARKYWHFIKLMGRSASHIALECALKTQPNVCLISEEVAAQSLTLAQIVQSLCDTIATRAQHGEHFGIVLVPE GLIEFIPEMKALITELNEVMARRAQEFEALDTPDAQRVWIEQALSASARAVFNALPAEISTQLLADRDPHGNVQVSRIDT ERLLILQVTERLAQMKQEGTYTGVFSSIAHFFGYEGRCAFPSNFDADYCYTLGLTACLLAVHRFTGYVASVRNLTSSVAE WAVGGVPLTMLMNMERRHGSQKPVIKKALVDLEGMPFRVFSRRRASWALKTSYVYPGAVQYYGPPAVCDEPSVTIRLERP APAANSSFGHRSS >Mature_572_residues SISLLQQERHRYLPKVPDLLRGDFRRVCARRGLSTTAVADYDALRSLFARTYGQPLVNFVNASEKNEDSPMETAPEPRGL RVAIVLSGGQAPGGHNVIAGLFDGLKRWHADSVLIGFLGGPAGVLSGDHIEICADRVDAYRNTGGFDLIGSGRTKIESES QFAAAAQTVTRMALDALVVVGGDDSNTNAALLAEHFVNSGISTKVIGVPKTIDGDLKNEAIETSFGFDTATKTYSELIGN IARDACSARKYWHFIKLMGRSASHIALECALKTQPNVCLISEEVAAQSLTLAQIVQSLCDTIATRAQHGEHFGIVLVPEG LIEFIPEMKALITELNEVMARRAQEFEALDTPDAQRVWIEQALSASARAVFNALPAEISTQLLADRDPHGNVQVSRIDTE RLLILQVTERLAQMKQEGTYTGVFSSIAHFFGYEGRCAFPSNFDADYCYTLGLTACLLAVHRFTGYVASVRNLTSSVAEW AVGGVPLTMLMNMERRHGSQKPVIKKALVDLEGMPFRVFSRRRASWALKTSYVYPGAVQYYGPPAVCDEPSVTIRLERPA PAANSSFGHRSS
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Escherichia coli, GI1790350, Length=242, Percent_Identity=27.6859504132231, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012828 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.11 [H]
Molecular weight: Translated: 62428; Mature: 62297
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISLLQQERHRYLPKVPDLLRGDFRRVCARRGLSTTAVADYDALRSLFARTYGQPLVNF CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHH VNASEKNEDSPMETAPEPRGLRVAIVLSGGQAPGGHNVIAGLFDGLKRWHADSVLIGFLG HCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC GPAGVLSGDHIEICADRVDAYRNTGGFDLIGSGRTKIESESQFAAAAQTVTRMALDALVV CCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEE VGGDDSNTNAALLAEHFVNSGISTKVIGVPKTIDGDLKNEAIETSFGFDTATKTYSELIG ECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH NIARDACSARKYWHFIKLMGRSASHIALECALKTQPNVCLISEEVAAQSLTLAQIVQSLC HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHH DTIATRAQHGEHFGIVLVPEGLIEFIPEMKALITELNEVMARRAQEFEALDTPDAQRVWI HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH EQALSASARAVFNALPAEISTQLLADRDPHGNVQVSRIDTERLLILQVTERLAQMKQEGT HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC YTGVFSSIAHFFGYEGRCAFPSNFDADYCYTLGLTACLLAVHRFTGYVASVRNLTSSVAE HHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WAVGGVPLTMLMNMERRHGSQKPVIKKALVDLEGMPFRVFSRRRASWALKTSYVYPGAVQ HHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCEEEEECEECCCCEE YYGPPAVCDEPSVTIRLERPAPAANSSFGHRSS ECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure SISLLQQERHRYLPKVPDLLRGDFRRVCARRGLSTTAVADYDALRSLFARTYGQPLVNF CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHH VNASEKNEDSPMETAPEPRGLRVAIVLSGGQAPGGHNVIAGLFDGLKRWHADSVLIGFLG HCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC GPAGVLSGDHIEICADRVDAYRNTGGFDLIGSGRTKIESESQFAAAAQTVTRMALDALVV CCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEE VGGDDSNTNAALLAEHFVNSGISTKVIGVPKTIDGDLKNEAIETSFGFDTATKTYSELIG ECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH NIARDACSARKYWHFIKLMGRSASHIALECALKTQPNVCLISEEVAAQSLTLAQIVQSLC HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHH DTIATRAQHGEHFGIVLVPEGLIEFIPEMKALITELNEVMARRAQEFEALDTPDAQRVWI HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH EQALSASARAVFNALPAEISTQLLADRDPHGNVQVSRIDTERLLILQVTERLAQMKQEGT HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC YTGVFSSIAHFFGYEGRCAFPSNFDADYCYTLGLTACLLAVHRFTGYVASVRNLTSSVAE HHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WAVGGVPLTMLMNMERRHGSQKPVIKKALVDLEGMPFRVFSRRRASWALKTSYVYPGAVQ HHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCEEEEECEECCCCEE YYGPPAVCDEPSVTIRLERPAPAANSSFGHRSS ECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA