| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is ppnK
Identifier: 189025673
GI number: 189025673
Start: 468479
End: 469396
Strand: Direct
Name: ppnK
Synonym: TPASS_0441
Alternate gene names: 189025673
Gene position: 468479-469396 (Clockwise)
Preceding gene: 189025672
Following gene: 189025674
Centisome position: 41.11
GC content: 53.81
Gene sequence:
>918_bases GTGAGCAGCCGCGTGTGTCCTCAGCGGCCTGTTGCAAAATCATCGGGGGACGCGAAGGTGTTGCTTATTGTCAGCACGTA CAAACCGCGCGCTGCGGTGCTCGCTGCGGACGTTGTGAACTTTCTGAGCATACGTGGATTCCAGTGCCACACCATTGAGT ATGATGGATTGAATAAAGAAAGCTGTGCTCGCGCAGGCTATATGTTTGCAGTCAGTATTGGGGGGGATGGTACTACACTG TTTGCCGCGCGCTGTGCTTCTCCTTCTGGTATTCCCATACTTGCCATAAATTTAGGGCGTTTCGGCTTTATCGCTCCTAT TGAGCCACGGTATTGGCAACAGGCGTTGAGCGATTATTTGGCAGGGGGGGTGCGCCCTGCTGAGCGTGCGCTCATATCGT GCACCGTCACGCGTGCGGGTAAAGAGATTGCTTCGTGTCTGGCGTTAAACGATGTTGTCCTTTCAAGTGGACGCGTCGCG CGTCTTACCCGGGCAGAGGTGTGCTTCAACGACATTTCTTTTGGCGTGTATGAAGCTGATGGCATTATTCTTGCGACGCC TACAGGATCTACTGCGTACTCGGCGGCCTGTGGCGGTCCCATCCTCGATCCGGACCTTGATGCGTTTGTCCTCACTCCCA TAAGCGCACTGTGCCTTTCTAATCGTCCCGTGGTAGTTCCCTCCTCAGGGGTGGTGCGTATCAAGGTGTTGTCTATGCGA CACAAAGAAACGGTGCTGTCTGTGGACGGACATGAATTGTGCACGTTGCAGGAAGAAGATCAGCTGCTTGCAAGCAGGTC ATCGTGCAGCGCACGATTGGTTTTCTGTACACCACACGTGTTCTACCATGCACTGTGCTCGAAACTGGCGTGGTCAGGGA GTATTTTTTCTCGCAGGGGAAGACGTCACGATGATTGA
Upstream 100 bases:
>100_bases ATGCATCTGCGCTTTTGTTGCGCTGCGTGCGCTTTCCGTTGTACCCGCGTCTTGCGCCTGCACACGCACAGGAAATTGCG CGCATCCTTGGGACACTGCC
Downstream 100 bases:
>100_bases GCAACTTTCGGTGCGCAACGTTGCGCTCATTCAATCTTTGGCGTTGGAGTTTGGTGCACAGTTTACTGCCCTCTCAGGGG AGACGGGTGCGGGTAAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSSRVCPQRPVAKSSGDAKVLLIVSTYKPRAAVLAADVVNFLSIRGFQCHTIEYDGLNKESCARAGYMFAVSIGGDGTTL FAARCASPSGIPILAINLGRFGFIAPIEPRYWQQALSDYLAGGVRPAERALISCTVTRAGKEIASCLALNDVVLSSGRVA RLTRAEVCFNDISFGVYEADGIILATPTGSTAYSAACGGPILDPDLDAFVLTPISALCLSNRPVVVPSSGVVRIKVLSMR HKETVLSVDGHELCTLQEEDQLLASRSSCSARLVFCTPHVFYHALCSKLAWSGSIFSRRGRRHDD
Sequences:
>Translated_305_residues MSSRVCPQRPVAKSSGDAKVLLIVSTYKPRAAVLAADVVNFLSIRGFQCHTIEYDGLNKESCARAGYMFAVSIGGDGTTL FAARCASPSGIPILAINLGRFGFIAPIEPRYWQQALSDYLAGGVRPAERALISCTVTRAGKEIASCLALNDVVLSSGRVA RLTRAEVCFNDISFGVYEADGIILATPTGSTAYSAACGGPILDPDLDAFVLTPISALCLSNRPVVVPSSGVVRIKVLSMR HKETVLSVDGHELCTLQEEDQLLASRSSCSARLVFCTPHVFYHALCSKLAWSGSIFSRRGRRHDD >Mature_304_residues SSRVCPQRPVAKSSGDAKVLLIVSTYKPRAAVLAADVVNFLSIRGFQCHTIEYDGLNKESCARAGYMFAVSIGGDGTTLF AARCASPSGIPILAINLGRFGFIAPIEPRYWQQALSDYLAGGVRPAERALISCTVTRAGKEIASCLALNDVVLSSGRVAR LTRAEVCFNDISFGVYEADGIILATPTGSTAYSAACGGPILDPDLDAFVLTPISALCLSNRPVVVPSSGVVRIKVLSMRH KETVLSVDGHELCTLQEEDQLLASRSSCSARLVFCTPHVFYHALCSKLAWSGSIFSRRGRRHDD
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Homo sapiens, GI55743112, Length=220, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1788968, Length=277, Percent_Identity=32.4909747292419, Blast_Score=151, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6320794, Length=241, Percent_Identity=28.2157676348548, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6322509, Length=241, Percent_Identity=28.6307053941909, Blast_Score=106, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6325068, Length=208, Percent_Identity=32.6923076923077, Blast_Score=104, Evalue=2e-23, Organism=Drosophila melanogaster, GI28573830, Length=217, Percent_Identity=30.8755760368664, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28573828, Length=217, Percent_Identity=30.8755760368664, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28573832, Length=217, Percent_Identity=30.8755760368664, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28573826, Length=217, Percent_Identity=30.8755760368664, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI161077047, Length=217, Percent_Identity=30.8755760368664, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI20129957, Length=275, Percent_Identity=25.4545454545455, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24653422, Length=275, Percent_Identity=27.6363636363636, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI281363321, Length=275, Percent_Identity=25.4545454545455, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI281363323, Length=275, Percent_Identity=25.4545454545455, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24653424, Length=275, Percent_Identity=25.4545454545455, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK_TREPA (O83455)
Other databases:
- EMBL: AE000520 - PIR: A71324 - RefSeq: NP_218881.1 - ProteinModelPortal: O83455 - SMR: O83455 - IntAct: O83455 - GeneID: 2610985 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0441 - NMPDR: fig|243276.1.peg.440 - TIGR: TP_0441 - HOGENOM: HBG713904 - OMA: LNEMVLH - ProtClustDB: CLSK218701 - BioCyc: TPAL243276:TP_0441-MONOMER - BRENDA: 2.7.1.23 - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 32634; Mature: 32503
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRVCPQRPVAKSSGDAKVLLIVSTYKPRAAVLAADVVNFLSIRGFQCHTIEYDGLNKE CCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHH SCARAGYMFAVSIGGDGTTLFAARCASPSGIPILAINLGRFGFIAPIEPRYWQQALSDYL HHHCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHH AGGVRPAERALISCTVTRAGKEIASCLALNDVVLSSGRVARLTRAEVCFNDISFGVYEAD HCCCCHHHHEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEECC GIILATPTGSTAYSAACGGPILDPDLDAFVLTPISALCLSNRPVVVPSSGVVRIKVLSMR CEEEECCCCCCCCHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCEEECCCCEEEEEEEEEC HKETVLSVDGHELCTLQEEDQLLASRSSCSARLVFCTPHVFYHALCSKLAWSGSIFSRRG CCCEEEEECCCEEEEECCHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHCC RRHDD CCCCC >Mature Secondary Structure SSRVCPQRPVAKSSGDAKVLLIVSTYKPRAAVLAADVVNFLSIRGFQCHTIEYDGLNKE CCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHH SCARAGYMFAVSIGGDGTTLFAARCASPSGIPILAINLGRFGFIAPIEPRYWQQALSDYL HHHCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHH AGGVRPAERALISCTVTRAGKEIASCLALNDVVLSSGRVARLTRAEVCFNDISFGVYEAD HCCCCHHHHEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEECC GIILATPTGSTAYSAACGGPILDPDLDAFVLTPISALCLSNRPVVVPSSGVVRIKVLSMR CEEEECCCCCCCCHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCEEECCCCEEEEEEEEEC HKETVLSVDGHELCTLQEEDQLLASRSSCSARLVFCTPHVFYHALCSKLAWSGSIFSRRG CCCEEEEECCCEEEEECCHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHCC RRHDD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876