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The map label for this gene is yfbE [C]

Identifier: 189025672

GI number: 189025672

Start: 467331

End: 468482

Strand: Direct

Name: yfbE [C]

Synonym: TPASS_0440

Alternate gene names: 189025672

Gene position: 467331-468482 (Clockwise)

Preceding gene: 189025671

Following gene: 189025673

Centisome position: 41.01

GC content: 56.34

Gene sequence:

>1152_bases
ATGGACGCGGTGCTCACCTGCTTGGTGGATGAAAAAATTGGCCCTGGTTCGCTTGGCAGCACCCTCATCCAGTTGGTGCG
CGAGGTGTTTTCTCCAATCGATGCATACGTGCTGCGCAGCCCCGCTATCGCACTTTCCTTTGCACTCCGTGCACTGAAAT
TGCCTCCTGCTTCCCCTGTACTTCTTTCTGCGCTTGCGCCCTTCTGGCACTACCGTGAGGTGCTTCACCAGGGGCTGCAG
CCGCTTGTCCTTGACGTAGACATTCACAGCGGTTTGTTGTCCCGTGATGTGGTGGAAACTGGCATCGCGCGTGGCGCTCG
TGCGCTTCTTGTGCCTGAAACACTTGGAAATGTGCCTCCTGCAGCGGTGTTTTTGGAACTGGGGATACCCGTCATCGAAG
ACAGCTCTCAGAGTGTCGGTGCAGTATTGGGAGAAAAGAAGGTGGGAACCTTTGGCTCGTGTGTCATCGTGGGATTGGAG
GCACACGATATGCTTACCGCAGGCGGCGGCGCGGTACTCATGGCCTTTGAGGCCGCCTGCGCGCGTCGGCTTCAGGCGCT
TGTGCCAGAAGCGCTTGCCGTTGATATGCTGCCGGATATGAACGCGGCGCTCGCGTGTGTCCAAGTAAAGCAGCAAGAAA
AAAATATTGCCCTCAGGCGCGCAATCTACGACCGATACTCCTCTGCGCTTTTGCGTACGCGTCACGGTACGCTTCACCGG
TGTGAGCAATTGGAACACAGTGCCTACGCTTTTCCTGTTGTCCTTGCTTCTGATCTGAAGGAAGTGACGCGTTACGTGCG
GCAGGCGTCCATTGAGATTTCTCCTGCCTTTGAACATTCCATTGTGGCAGCGTTTCAATTACCTGCTATGCGCAGACGGT
GGCCTTTTCCGCAGTTTCTTCCTACTTCTGCATCGCACACGGCACCTTTTCAGGGTGAGGACAGGGAGGTACTAGAGACC
ACGCAGGGCGCGGAAAAAACCTGTCAGGACTCTAGCTGGGAAAGGGAAGTGCGTGCGTCTGAGATTACGCCTGAGATGTG
TTGGCCACATGCATCTGCGCTTTTGTTGCGCTGCGTGCGCTTTCCGTTGTACCCGCGTCTTGCGCCTGCACACGCACAGG
AAATTGCGCGCATCCTTGGGACACTGCCGTGA

Upstream 100 bases:

>100_bases
CGAACCTCTAGTGCCCCACCGCTGTCTGTCTCCTGCCTGCAGCTCCAAGCGCCGTGCGGGGTCCATCCCCGTCCACAGCC
CCGCCATCCGAAGGTCCGAA

Downstream 100 bases:

>100_bases
GCAGCCGCGTGTGTCCTCAGCGGCCTGTTGCAAAATCATCGGGGGACGCGAAGGTGTTGCTTATTGTCAGCACGTACAAA
CCGCGCGCTGCGGTGCTCGC

Product: spore coat polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Aminotransferase; Spore Coat Polysaccharide Biosynthesis Protein; DegT/DnrJ/EryC1/StrS Aminotransferase

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MDAVLTCLVDEKIGPGSLGSTLIQLVREVFSPIDAYVLRSPAIALSFALRALKLPPASPVLLSALAPFWHYREVLHQGLQ
PLVLDVDIHSGLLSRDVVETGIARGARALLVPETLGNVPPAAVFLELGIPVIEDSSQSVGAVLGEKKVGTFGSCVIVGLE
AHDMLTAGGGAVLMAFEAACARRLQALVPEALAVDMLPDMNAALACVQVKQQEKNIALRRAIYDRYSSALLRTRHGTLHR
CEQLEHSAYAFPVVLASDLKEVTRYVRQASIEISPAFEHSIVAAFQLPAMRRRWPFPQFLPTSASHTAPFQGEDREVLET
TQGAEKTCQDSSWEREVRASEITPEMCWPHASALLLRCVRFPLYPRLAPAHAQEIARILGTLP

Sequences:

>Translated_383_residues
MDAVLTCLVDEKIGPGSLGSTLIQLVREVFSPIDAYVLRSPAIALSFALRALKLPPASPVLLSALAPFWHYREVLHQGLQ
PLVLDVDIHSGLLSRDVVETGIARGARALLVPETLGNVPPAAVFLELGIPVIEDSSQSVGAVLGEKKVGTFGSCVIVGLE
AHDMLTAGGGAVLMAFEAACARRLQALVPEALAVDMLPDMNAALACVQVKQQEKNIALRRAIYDRYSSALLRTRHGTLHR
CEQLEHSAYAFPVVLASDLKEVTRYVRQASIEISPAFEHSIVAAFQLPAMRRRWPFPQFLPTSASHTAPFQGEDREVLET
TQGAEKTCQDSSWEREVRASEITPEMCWPHASALLLRCVRFPLYPRLAPAHAQEIARILGTLP
>Mature_383_residues
MDAVLTCLVDEKIGPGSLGSTLIQLVREVFSPIDAYVLRSPAIALSFALRALKLPPASPVLLSALAPFWHYREVLHQGLQ
PLVLDVDIHSGLLSRDVVETGIARGARALLVPETLGNVPPAAVFLELGIPVIEDSSQSVGAVLGEKKVGTFGSCVIVGLE
AHDMLTAGGGAVLMAFEAACARRLQALVPEALAVDMLPDMNAALACVQVKQQEKNIALRRAIYDRYSSALLRTRHGTLHR
CEQLEHSAYAFPVVLASDLKEVTRYVRQASIEISPAFEHSIVAAFQLPAMRRRWPFPQFLPTSASHTAPFQGEDREVLET
TQGAEKTCQDSSWEREVRASEITPEMCWPHASALLLRCVRFPLYPRLAPAHAQEIARILGTLP

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41712; Mature: 41712

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVLTCLVDEKIGPGSLGSTLIQLVREVFSPIDAYVLRSPAIALSFALRALKLPPASPV
CCHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHH
LLSALAPFWHYREVLHQGLQPLVLDVDIHSGLLSRDVVETGIARGARALLVPETLGNVPP
HHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHCCCCEEECCHHHCCCCH
AAVFLELGIPVIEDSSQSVGAVLGEKKVGTFGSCVIVGLEAHDMLTAGGGAVLMAFEAAC
HHHHHHCCCCEECCCCCHHHHHHCCCCCCCCCCEEEEEECHHHHHCCCCCHHHHHHHHHH
ARRLQALVPEALAVDMLPDMNAALACVQVKQQEKNIALRRAIYDRYSSALLRTRHGTLHR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
CEQLEHSAYAFPVVLASDLKEVTRYVRQASIEISPAFEHSIVAAFQLPAMRRRWPFPQFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCC
PTSASHTAPFQGEDREVLETTQGAEKTCQDSSWEREVRASEITPEMCWPHASALLLRCVR
CCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHH
FPLYPRLAPAHAQEIARILGTLP
CCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDAVLTCLVDEKIGPGSLGSTLIQLVREVFSPIDAYVLRSPAIALSFALRALKLPPASPV
CCHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHH
LLSALAPFWHYREVLHQGLQPLVLDVDIHSGLLSRDVVETGIARGARALLVPETLGNVPP
HHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHCCCCEEECCHHHCCCCH
AAVFLELGIPVIEDSSQSVGAVLGEKKVGTFGSCVIVGLEAHDMLTAGGGAVLMAFEAAC
HHHHHHCCCCEECCCCCHHHHHHCCCCCCCCCCEEEEEECHHHHHCCCCCHHHHHHHHHH
ARRLQALVPEALAVDMLPDMNAALACVQVKQQEKNIALRRAIYDRYSSALLRTRHGTLHR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
CEQLEHSAYAFPVVLASDLKEVTRYVRQASIEISPAFEHSIVAAFQLPAMRRRWPFPQFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCC
PTSASHTAPFQGEDREVLETTQGAEKTCQDSSWEREVRASEITPEMCWPHASALLLRCVR
CCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHH
FPLYPRLAPAHAQEIARILGTLP
CCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA