Click here to switch to the map view.

The map label for this gene is 189025625

Identifier: 189025625

GI number: 189025625

Start: 417887

End: 418846

Strand: Direct

Name: 189025625

Synonym: TPASS_0392

Alternate gene names: NA

Gene position: 417887-418846 (Clockwise)

Preceding gene: 189025624

Following gene: 189025626

Centisome position: 36.67

GC content: 50.62

Gene sequence:

>960_bases
TTGAAATCCGCTCAGGGGTGGAGACGCACGTTCATACGTTTCGCCATTCATATGCGACGCATTTGCTTGCAGGCGGTGTC
GATTTACATTCGGTTCAGTGTCTGCTCGGCCATGCAGATATTGCAACTACCCAGGTGTACACACACGTGGAAAATGGACA
GCTCGAAGCGTGTCACCGCGCGTGTTTTTCTTCAGAAGGTCTTCGTGATGAAAACTAGGCGGTGTGCGTCATATGTGGGC
GGTGCACTGTGCGCGGCGTTCTTTTTTTTTCATTCCTGTAAGGAGCGTCGCACCGTGCAACGTGTTCAGGATTTAGAGAA
AGGAGTGCCCCATCCAACCTCTATTGAAGAACTGCGGAGGGCAGTAAAGCTGCACGAACAGCGCCTCGAGCGTTTGCACG
CAGTGCAGGATCAGGTGGGTGTTTGGTACAAGATGCTCGCGTTGCGCTACTTCGATCGTAAGATGTATACGCACGCGCTT
GATGCGTTTACCCAGGCCATTACCTTTGCTCCCGAAAATAAGCATCTTTTTTTTTACCAGGCGTTGTGTGCCGCATATGC
GGCTAAGTACGTCGCTCCTATTGATCCTGAGAAGAAAATGCAGCAGCAAGCTGCTTATCGCGCGTTAGCAGTCTCTGCGT
ATGTGCGTGCGCTCTCGTTGGACGCGCAGTATTCCCACGCGTTGTACGGTCTTTCTGTATTGTATGTATTTGAACTGAAT
CAGCCACAGAACGCGGTTCCTCATTTGCAAAAGCTCCTCGAATTGAAAGAAAATACAGAAGCAGCTTTGTTCGTTCTTGC
GCGCGCATACTACACACTTGGACGATATGCTCAGGCAATAGAGTGTTACGATCGCATCCTTGTCCAAAGCAGTGACTCCC
ATCAGAGAGATCGTGCGCGACAGAATAAAGAATTAGTCACGAATGTATCGCAGCGTGCTACGCGTGGGGACCGTGGATGA

Upstream 100 bases:

>100_bases
GCGAAGCATCCGGAGAATAGTGAAAAAAAAGGAGCTGTCTTTTTAAACAGGCAGGGGGGTCGTCTGAGTCGTAAAGGTAT
ATGGAAGCGCCTGCAGGATA

Downstream 100 bases:

>100_bases
ACACGGATACTGTACTCACTGAAACGCACAAGATTGCTCTTGCGCTCTCTTACTGTCACTTTTTAAAAGGTGGGGAGCGG
TTGCGCGTTTCAAAAGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKSAQGWRRTFIRFAIHMRRICLQAVSIYIRFSVCSAMQILQLPRCTHTWKMDSSKRVTARVFLQKVFVMKTRRCASYVG
GALCAAFFFFHSCKERRTVQRVQDLEKGVPHPTSIEELRRAVKLHEQRLERLHAVQDQVGVWYKMLALRYFDRKMYTHAL
DAFTQAITFAPENKHLFFYQALCAAYAAKYVAPIDPEKKMQQQAAYRALAVSAYVRALSLDAQYSHALYGLSVLYVFELN
QPQNAVPHLQKLLELKENTEAALFVLARAYYTLGRYAQAIECYDRILVQSSDSHQRDRARQNKELVTNVSQRATRGDRG

Sequences:

>Translated_319_residues
MKSAQGWRRTFIRFAIHMRRICLQAVSIYIRFSVCSAMQILQLPRCTHTWKMDSSKRVTARVFLQKVFVMKTRRCASYVG
GALCAAFFFFHSCKERRTVQRVQDLEKGVPHPTSIEELRRAVKLHEQRLERLHAVQDQVGVWYKMLALRYFDRKMYTHAL
DAFTQAITFAPENKHLFFYQALCAAYAAKYVAPIDPEKKMQQQAAYRALAVSAYVRALSLDAQYSHALYGLSVLYVFELN
QPQNAVPHLQKLLELKENTEAALFVLARAYYTLGRYAQAIECYDRILVQSSDSHQRDRARQNKELVTNVSQRATRGDRG
>Mature_319_residues
MKSAQGWRRTFIRFAIHMRRICLQAVSIYIRFSVCSAMQILQLPRCTHTWKMDSSKRVTARVFLQKVFVMKTRRCASYVG
GALCAAFFFFHSCKERRTVQRVQDLEKGVPHPTSIEELRRAVKLHEQRLERLHAVQDQVGVWYKMLALRYFDRKMYTHAL
DAFTQAITFAPENKHLFFYQALCAAYAAKYVAPIDPEKKMQQQAAYRALAVSAYVRALSLDAQYSHALYGLSVLYVFELN
QPQNAVPHLQKLLELKENTEAALFVLARAYYTLGRYAQAIECYDRILVQSSDSHQRDRARQNKELVTNVSQRATRGDRG

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 37033; Mature: 37033

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]