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The map label for this gene is smf [H]

Identifier: 189025626

GI number: 189025626

Start: 418843

End: 419751

Strand: Direct

Name: smf [H]

Synonym: TPASS_0393

Alternate gene names: 189025626

Gene position: 418843-419751 (Clockwise)

Preceding gene: 189025625

Following gene: 189025627

Centisome position: 36.76

GC content: 49.72

Gene sequence:

>909_bases
ATGAACACGGATACTGTACTCACTGAAACGCACAAGATTGCTCTTGCGCTCTCTTACTGTCACTTTTTAAAAGGTGGGGA
GCGGTTGCGCGTTTCAAAAGCTGTAGGTTCTTTTCAGGAGCTTACTGCATGGAAGGTGCGTGATTTTGAGCGTGTTGTAG
AAAGGCACATACGCACTGCGGGTGCGCAACTTTCTGCGTTGCCTCACCTCGTTCGGCACGGTATACAAACCATGCGGTGT
TATCAGATAAAAATGGTGTTCAAAGACGATGATGCGTTTCCCTCCTGGTTAAGAGAAATAAGTGATGTACCGTTTGTGCT
GTTCTATCGGGGCACTTTGCCGTGTGCAACCCAACCTATTGTGGGGATGGTTGGCACACGTACTCCAACCGGTGAAGGAG
TTCGGAACAGTTTGGCCTTTTCCAAGGCGTGTGCTGAATCGGGCATTGCCATTGTTTCAGGACTTGCACGTGGAATAGAC
GGATTCTGTCACAAAGGAGCATTAGCAGGTGGTGGGTACACCCTCGCAGTACTTGCCTGTGGTGTAGACCAGTTATATCC
ACGCTCAAATAGCGCGCTTGCTGCACGGATTATAGAAACCGGAGGATGCATTCTGAGTGAATATGCGCCATCTGAGCATG
TGATGCGCTATCGTTTTCCTGAACGCAATAGGCTCATTTCAGGTTTGGCACGATCGCTCGTTGTTATGGAAGCACCAAAG
AAGTCAGGCGCGTTGATTACCGCATTGTGTGCCTTGGAACAGGGACGTGATGTGTACGTGTATGAACCCTTGCTTGAAAG
TCTTCAAAATGAGGGAGGAAGACTTCTGCATGCAGAAGGTGCACGCGCGCTGACGTGCGTGCAGGATATGTTTGACGATT
GGGAATACGCATGTACGGGTCGGACGTAG

Upstream 100 bases:

>100_bases
TCCTTGTCCAAAGCAGTGACTCCCATCAGAGAGATCGTGCGCGACAGAATAAAGAATTAGTCACGAATGTATCGCAGCGT
GCTACGCGTGGGGACCGTGG

Downstream 100 bases:

>100_bases
GACAGTTTCGGTAAGCATAGGGGGCGGAAAACATGGAAGTGCGTGGGCTACAACCGAAAAGGCAGAAGACATTTGCGCGG
AAGCATTTGGTTATTGTGGA

Product: protein Smf

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNTDTVLTETHKIALALSYCHFLKGGERLRVSKAVGSFQELTAWKVRDFERVVERHIRTAGAQLSALPHLVRHGIQTMRC
YQIKMVFKDDDAFPSWLREISDVPFVLFYRGTLPCATQPIVGMVGTRTPTGEGVRNSLAFSKACAESGIAIVSGLARGID
GFCHKGALAGGGYTLAVLACGVDQLYPRSNSALAARIIETGGCILSEYAPSEHVMRYRFPERNRLISGLARSLVVMEAPK
KSGALITALCALEQGRDVYVYEPLLESLQNEGGRLLHAEGARALTCVQDMFDDWEYACTGRT

Sequences:

>Translated_302_residues
MNTDTVLTETHKIALALSYCHFLKGGERLRVSKAVGSFQELTAWKVRDFERVVERHIRTAGAQLSALPHLVRHGIQTMRC
YQIKMVFKDDDAFPSWLREISDVPFVLFYRGTLPCATQPIVGMVGTRTPTGEGVRNSLAFSKACAESGIAIVSGLARGID
GFCHKGALAGGGYTLAVLACGVDQLYPRSNSALAARIIETGGCILSEYAPSEHVMRYRFPERNRLISGLARSLVVMEAPK
KSGALITALCALEQGRDVYVYEPLLESLQNEGGRLLHAEGARALTCVQDMFDDWEYACTGRT
>Mature_302_residues
MNTDTVLTETHKIALALSYCHFLKGGERLRVSKAVGSFQELTAWKVRDFERVVERHIRTAGAQLSALPHLVRHGIQTMRC
YQIKMVFKDDDAFPSWLREISDVPFVLFYRGTLPCATQPIVGMVGTRTPTGEGVRNSLAFSKACAESGIAIVSGLARGID
GFCHKGALAGGGYTLAVLACGVDQLYPRSNSALAARIIETGGCILSEYAPSEHVMRYRFPERNRLISGLARSLVVMEAPK
KSGALITALCALEQGRDVYVYEPLLESLQNEGGRLLHAEGARALTCVQDMFDDWEYACTGRT

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=229, Percent_Identity=35.3711790393013, Blast_Score=145, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 33106; Mature: 33106

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTDTVLTETHKIALALSYCHFLKGGERLRVSKAVGSFQELTAWKVRDFERVVERHIRTA
CCCCCEEEHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GAQLSALPHLVRHGIQTMRCYQIKMVFKDDDAFPSWLREISDVPFVLFYRGTLPCATQPI
CHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCH
VGMVGTRTPTGEGVRNSLAFSKACAESGIAIVSGLARGIDGFCHKGALAGGGYTLAVLAC
HHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHH
GVDQLYPRSNSALAARIIETGGCILSEYAPSEHVMRYRFPERNRLISGLARSLVVMEAPK
CHHHHCCCCCCHHHHHHHHCCCEEEECCCCCHHHHEECCCHHHHHHHHHHHHHHEEECCC
KSGALITALCALEQGRDVYVYEPLLESLQNEGGRLLHAEGARALTCVQDMFDDWEYACTG
CCCCHHHHHHHHHCCCEEEEEHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCEECC
RT
CC
>Mature Secondary Structure
MNTDTVLTETHKIALALSYCHFLKGGERLRVSKAVGSFQELTAWKVRDFERVVERHIRTA
CCCCCEEEHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GAQLSALPHLVRHGIQTMRCYQIKMVFKDDDAFPSWLREISDVPFVLFYRGTLPCATQPI
CHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCH
VGMVGTRTPTGEGVRNSLAFSKACAESGIAIVSGLARGIDGFCHKGALAGGGYTLAVLAC
HHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHH
GVDQLYPRSNSALAARIIETGGCILSEYAPSEHVMRYRFPERNRLISGLARSLVVMEAPK
CHHHHCCCCCCHHHHHHHHCCCEEEECCCCCHHHHEECCCHHHHHHHHHHHHHHEEECCC
KSGALITALCALEQGRDVYVYEPLLESLQNEGGRLLHAEGARALTCVQDMFDDWEYACTG
CCCCHHHHHHHHHCCCEEEEEHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCEECC
RT
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]