| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is 188587308
Identifier: 188587308
GI number: 188587308
Start: 2927543
End: 2928745
Strand: Direct
Name: 188587308
Synonym: Nther_2711
Alternate gene names: NA
Gene position: 2927543-2928745 (Clockwise)
Preceding gene: 188587307
Following gene: 188587309
Centisome position: 92.48
GC content: 41.15
Gene sequence:
>1203_bases TTGAATCGAACTGGACAGGAACCTTTGTTAATTAGATCTGTCAATGTAATCACCGGACAGAATGACGAAATATTAGAACA GTACGATGTTTATATAGAGCAGGGAAGTATCGCTAAGATAGGCAAAAACTTAGCAAATGAGGCCAAGTTAGCTGATTGGA ATGTCATTGAAGGAACGGGCAAGTATTTAATCCCAGGCCTAATTGACACCCATGTTCATTTAGTTTGGGACGGAAGTGGT GATCCCCAGGCAGAAATTGAAGGCAAAAGCGAGTCTTACATGGCCTTGATGGCTGCTCGACAAGCTCAAGATTGTCTTAA AAACGGCATCACTACTGTAAGAGACGTAGGAAGCCCGGGAGAAACTGTTTTAAATTTAAGGGATGCCATTAAAGGTGGAA AGCTTGAGGGTGCAAACATTGTCAGTTCTGGTTCTGCCCTTGTAATGATCGGTGGCCATGGCTGGTTTTTAGGAACAGAA ATTTCCGGCCCTGAAGAAGCACGCAGAGCAGCTAGAGAAGTTTTAAAACAAGGGGCTGACCTGATAAAAGTTATGGCTAC AGGCGGTATTTATACCCAAGGTGAAGAGCCGGGAGCTCCCCAACTCTCAGAAGAAGAGATGAGAGCTGCTGTGGTAGAAG CTCATAACCAAGGGAAAAAAGTGGCTTCTCACGCCCAGGGATCAACTGGTATCCACAACTCTATCCAAGCCGGTGTAGAT TCAGTAGAACACTGCATATTTGCCGATGAGAAAGCATTAACTAATATGCAAGATAGAAATATCTTTATGGTACCTACCCT GGCGGTTATGAAGCGAATGGCTGATATCGGGGTTGGTGGAGGACTACCAGAATATGCTGCGGAAAAAGCCAAAAGAGTTG TCAAAATTCACAAGGAAACATTCAAAACTGCAGTTGATTTAAATGTCAAAATTGCAGTAGGTACAGATTTGTTTGCACCT TATCTGCCTGTTGAGCAATATTTTACCGAATTAAAAATTATGAATGATTACGGTATGTCTCTGTCTGATGTGTTGAAGTC AGCAACATCAGTAGCTGCTGAACTCCTCCAGTTAGAAGATAGAGGTGTTATTGCAGAAAATAAAGTGGCAGATTTAGTTT TATTAAATGAAAATCCTCTTAATGATGTTAAGGCCTATCAGAATCAAGAAATGATTATTAAAGAAGGTAGAATAATTAAA TAA
Upstream 100 bases:
>100_bases GACATTGTAGGCTATGACCCGGCCCTGATATCCGTTCCTGTGGCTATTATAGTCTTGGTAGTAGTTAGTTTGATGACCCA AAGTTCAAGGAGGGAGTAAC
Downstream 100 bases:
>100_bases GTTAGATAAATTCAACTACAGTTTTAGCAAGCAGAATTTAATAAGGGCTTGTCCATTTAAAAGAGGCTTGTCCATTTGCT AGAGTAAATTTTGATATAAC
Product: amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MNRTGQEPLLIRSVNVITGQNDEILEQYDVYIEQGSIAKIGKNLANEAKLADWNVIEGTGKYLIPGLIDTHVHLVWDGSG DPQAEIEGKSESYMALMAARQAQDCLKNGITTVRDVGSPGETVLNLRDAIKGGKLEGANIVSSGSALVMIGGHGWFLGTE ISGPEEARRAAREVLKQGADLIKVMATGGIYTQGEEPGAPQLSEEEMRAAVVEAHNQGKKVASHAQGSTGIHNSIQAGVD SVEHCIFADEKALTNMQDRNIFMVPTLAVMKRMADIGVGGGLPEYAAEKAKRVVKIHKETFKTAVDLNVKIAVGTDLFAP YLPVEQYFTELKIMNDYGMSLSDVLKSATSVAAELLQLEDRGVIAENKVADLVLLNENPLNDVKAYQNQEMIIKEGRIIK
Sequences:
>Translated_400_residues MNRTGQEPLLIRSVNVITGQNDEILEQYDVYIEQGSIAKIGKNLANEAKLADWNVIEGTGKYLIPGLIDTHVHLVWDGSG DPQAEIEGKSESYMALMAARQAQDCLKNGITTVRDVGSPGETVLNLRDAIKGGKLEGANIVSSGSALVMIGGHGWFLGTE ISGPEEARRAAREVLKQGADLIKVMATGGIYTQGEEPGAPQLSEEEMRAAVVEAHNQGKKVASHAQGSTGIHNSIQAGVD SVEHCIFADEKALTNMQDRNIFMVPTLAVMKRMADIGVGGGLPEYAAEKAKRVVKIHKETFKTAVDLNVKIAVGTDLFAP YLPVEQYFTELKIMNDYGMSLSDVLKSATSVAAELLQLEDRGVIAENKVADLVLLNENPLNDVKAYQNQEMIIKEGRIIK >Mature_400_residues MNRTGQEPLLIRSVNVITGQNDEILEQYDVYIEQGSIAKIGKNLANEAKLADWNVIEGTGKYLIPGLIDTHVHLVWDGSG DPQAEIEGKSESYMALMAARQAQDCLKNGITTVRDVGSPGETVLNLRDAIKGGKLEGANIVSSGSALVMIGGHGWFLGTE ISGPEEARRAAREVLKQGADLIKVMATGGIYTQGEEPGAPQLSEEEMRAAVVEAHNQGKKVASHAQGSTGIHNSIQAGVD SVEHCIFADEKALTNMQDRNIFMVPTLAVMKRMADIGVGGGLPEYAAEKAKRVVKIHKETFKTAVDLNVKIAVGTDLFAP YLPVEQYFTELKIMNDYGMSLSDVLKSATSVAAELLQLEDRGVIAENKVADLVLLNENPLNDVKAYQNQEMIIKEGRIIK
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=317, Percent_Identity=29.6529968454259, Blast_Score=124, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 43237; Mature: 43237
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTGQEPLLIRSVNVITGQNDEILEQYDVYIEQGSIAKIGKNLANEAKLADWNVIEGTG CCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCC KYLIPGLIDTHVHLVWDGSGDPQAEIEGKSESYMALMAARQAQDCLKNGITTVRDVGSPG CEECCCEECCEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCH ETVLNLRDAIKGGKLEGANIVSSGSALVMIGGHGWFLGTEISGPEEARRAAREVLKQGAD HHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHCCHH LIKVMATGGIYTQGEEPGAPQLSEEEMRAAVVEAHNQGKKVASHAQGSTGIHNSIQAGVD HHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHH SVEHCIFADEKALTNMQDRNIFMVPTLAVMKRMADIGVGGGLPEYAAEKAKRVVKIHKET HHHHHHHCCHHHHCCCCCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH FKTAVDLNVKIAVGTDLFAPYLPVEQYFTELKIMNDYGMSLSDVLKSATSVAAELLQLED HHHHHCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC RGVIAENKVADLVLLNENPLNDVKAYQNQEMIIKEGRIIK CCCEECCCCEEEEEECCCCCHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure MNRTGQEPLLIRSVNVITGQNDEILEQYDVYIEQGSIAKIGKNLANEAKLADWNVIEGTG CCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCC KYLIPGLIDTHVHLVWDGSGDPQAEIEGKSESYMALMAARQAQDCLKNGITTVRDVGSPG CEECCCEECCEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCH ETVLNLRDAIKGGKLEGANIVSSGSALVMIGGHGWFLGTEISGPEEARRAAREVLKQGAD HHHHHHHHHHCCCCCCCCEEEECCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHCCHH LIKVMATGGIYTQGEEPGAPQLSEEEMRAAVVEAHNQGKKVASHAQGSTGIHNSIQAGVD HHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHH SVEHCIFADEKALTNMQDRNIFMVPTLAVMKRMADIGVGGGLPEYAAEKAKRVVKIHKET HHHHHHHCCHHHHCCCCCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH FKTAVDLNVKIAVGTDLFAPYLPVEQYFTELKIMNDYGMSLSDVLKSATSVAAELLQLED HHHHHCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC RGVIAENKVADLVLLNENPLNDVKAYQNQEMIIKEGRIIK CCCEECCCCEEEEEECCCCCHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]