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The map label for this gene is ydfK [H]

Identifier: 188586863

GI number: 188586863

Start: 2396680

End: 2397387

Strand: Reverse

Name: ydfK [H]

Synonym: Nther_2254

Alternate gene names: 188586863

Gene position: 2397387-2396680 (Counterclockwise)

Preceding gene: 188586864

Following gene: 188586862

Centisome position: 75.73

GC content: 43.08

Gene sequence:

>708_bases
ATGCCCTTAATATTGGAACTAGGTGATGCATTACAGGGTACTGTAGTTAATGTGATTGCAATTATAGCCGGGGCGGTTTT
AGGGCTGGTCTTGAAAAAAGGTGTTCCGGAACAGATGAAAAACACCGTCCTTCAGGGTATGGGGCTGGTTGTCTTGTATC
TTGGCCTTTCCATGGCCTTTGAGGGACAAGAGATGTTAATAGCTATTTTCAGTTTAGTTCTGGGAGGAATTTTAGGAGAA
CTGGCCAAGGTAGAACAACGCCTAAATTCCTTTGGAGACAAATTAAAAGCCAGGTTTGGCAGTGAAGAAGGCCAGTTTAC
GGAAGGTTTTGTTTTTGCCAGCTTAATTTACTGTGTAGGAGCACTGGCTGTAGTAGGTTCTCTGGAAAGTGGCTTAAATA
GCAATCATGAAATTTTGTACACCAAGTCAGCCATAGATGGTGTGACTGCCATTGCCTTTACATCCAGCTTGGGGCTGGGA
GTAGCATTTTCCGCTCTACCGGTCTTTATATATCAGGGTTTTATTGCCGTGTTTGCCAGCGGAGTTTCGGATTATCTATC
CGATGAAGTAGTAGCCGAGATGAGCTCTGTAGGAGGAATATTGATAATGGCTATTGGATTGAATGTTTTAGAGGTTACCC
AAATTAAAATAGCTAATCTCCTGCCTGCAATTCTGGTTGCCGCTGTCATCGCAAATTTCGTGTTTTAA

Upstream 100 bases:

>100_bases
ACTCTGTTGACTGTATTAGACTAACATATATCATTGAAATTTTAGCGACTTTTAACTTTAGTTAATTAAATTCTACAAGT
GACAGGTGGGAGGGTTTTAC

Downstream 100 bases:

>100_bases
AAATATTTAAATGAAAACATGTGAATACAACATATGAATGGAATGAAACATAAAGGAGCCTTTTGAGGGCTCTTTTTTAT
TTGCATTAAAATTCACAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MPLILELGDALQGTVVNVIAIIAGAVLGLVLKKGVPEQMKNTVLQGMGLVVLYLGLSMAFEGQEMLIAIFSLVLGGILGE
LAKVEQRLNSFGDKLKARFGSEEGQFTEGFVFASLIYCVGALAVVGSLESGLNSNHEILYTKSAIDGVTAIAFTSSLGLG
VAFSALPVFIYQGFIAVFASGVSDYLSDEVVAEMSSVGGILIMAIGLNVLEVTQIKIANLLPAILVAAVIANFVF

Sequences:

>Translated_235_residues
MPLILELGDALQGTVVNVIAIIAGAVLGLVLKKGVPEQMKNTVLQGMGLVVLYLGLSMAFEGQEMLIAIFSLVLGGILGE
LAKVEQRLNSFGDKLKARFGSEEGQFTEGFVFASLIYCVGALAVVGSLESGLNSNHEILYTKSAIDGVTAIAFTSSLGLG
VAFSALPVFIYQGFIAVFASGVSDYLSDEVVAEMSSVGGILIMAIGLNVLEVTQIKIANLLPAILVAAVIANFVF
>Mature_234_residues
PLILELGDALQGTVVNVIAIIAGAVLGLVLKKGVPEQMKNTVLQGMGLVVLYLGLSMAFEGQEMLIAIFSLVLGGILGEL
AKVEQRLNSFGDKLKARFGSEEGQFTEGFVFASLIYCVGALAVVGSLESGLNSNHEILYTKSAIDGVTAIAFTSSLGLGV
AFSALPVFIYQGFIAVFASGVSDYLSDEVVAEMSSVGGILIMAIGLNVLEVTQIKIANLLPAILVAAVIANFVF

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=171, Percent_Identity=22.8070175438596, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24492; Mature: 24361

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLILELGDALQGTVVNVIAIIAGAVLGLVLKKGVPEQMKNTVLQGMGLVVLYLGLSMAF
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
EGQEMLIAIFSLVLGGILGELAKVEQRLNSFGDKLKARFGSEEGQFTEGFVFASLIYCVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ALAVVGSLESGLNSNHEILYTKSAIDGVTAIAFTSSLGLGVAFSALPVFIYQGFIAVFAS
HHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVSDYLSDEVVAEMSSVGGILIMAIGLNVLEVTQIKIANLLPAILVAAVIANFVF
HHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLILELGDALQGTVVNVIAIIAGAVLGLVLKKGVPEQMKNTVLQGMGLVVLYLGLSMAF
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
EGQEMLIAIFSLVLGGILGELAKVEQRLNSFGDKLKARFGSEEGQFTEGFVFASLIYCVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ALAVVGSLESGLNSNHEILYTKSAIDGVTAIAFTSSLGLGVAFSALPVFIYQGFIAVFAS
HHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVSDYLSDEVVAEMSSVGGILIMAIGLNVLEVTQIKIANLLPAILVAAVIANFVF
HHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]