Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188586862

Identifier: 188586862

GI number: 188586862

Start: 2394126

End: 2396399

Strand: Reverse

Name: 188586862

Synonym: Nther_2253

Alternate gene names: NA

Gene position: 2396399-2394126 (Counterclockwise)

Preceding gene: 188586863

Following gene: 188586861

Centisome position: 75.7

GC content: 40.99

Gene sequence:

>2274_bases
TTGAGATTAATCACAGTGTTACTAGGAGCAACTTTTTTGATCTCCTCCTGGTTGGCCCCTGGATTAGGAGAAACAGCGGT
TTTAAAAGAAGCAGAACCTCATCCCGTAATAGAAGCAGAACAAAAAGATGCAAACTTGACCGAGGAAGAAGTGATTCAAC
TAGTGGAAGAACTTATTCCCACAACCCAGGATTTAGAGCTGGAAAGAGCAGACTTCAATGATAACTTTGGGAGATGGCAA
TTAGGGTTTGAAACGCCCCAAGAAGTAGAAGATAAGTATTATAGTACGAATGTCTATATTTGTGATGAAAATAAGAATTT
AGAAAGTTTTACAATGCTCATGAGAGAACTGGAAGTAGAAGATCCCAAATACGTAACTCATCAGAAAAGTGAAGAAATTG
CCAGGGAATTTCTGAAACGAGCGGATTATGATCTTGAAGAACTGGGAGAATTTGAACTACTGACCCAGGAGATTTCACCT
AGTGAAAAAGTTCATCATTATGGTACAAATCTGTCTCACAACTTTACTTTTCGCCAGCTCTACGATGGTTACGGATCAAA
CAATGAATTTACCGTATACGTCAGTTCACGAACGGGAGAAGTTACGCGTTTTTTAAATAATTATGATTCAGATTTGGAAT
TTGAGGAAGTTGATCATGTTATAGACAAAGACAAGGCCGAAGACCTCTTTATTCAGGCGGGAGCAGAACTGGAATACGAC
ATTGATTATCGAAATGAAAAAATTGATCTACAGTACAGTCCCATTGTAGGCAATGATGCCAAAATAGATGCAGAGACGGG
AGAGTATCTAGATTTTGATGGCGAAACCAAAGATTTGGAAGAGATCAAAAACTCAAAGCCCGAAGTAGATTTGGATATGG
GTGCTCTGGAGATTGACAGACTTGATGAGCCTCTGGATCGAAGGGATCAAGCTAGGCTCTCTAATAAGGTGGAAGAAGTA
GTATCATCAGCCTTCGATGTTGAAGGTGAACCTTCTCAAACAGGCTCAGGCGGAACCTTAAGAAGCGGTCCATTAGAAAT
TGAACGTGTCAGTACTGATTATCAGGTCGAGGATCCTGATGTGGTTTTAGACGTCAATATTGAGAAAAACCGTGGTTATC
TAAACAAAATTGACGTGAAGCCCATGACCGACGACCCTCTGATTTCAGTAGGAGATGAGGAGTATAGCGAACAACTTGCT
CAAGCCTTGACAGAGCTGGCAGAAGATGAAACAGAAGCAAACTTTGAACAAGTAGCTGAGAAATATCTAACCAAGTTGAC
CCCAGAGTTTTTAGATTATCTGGACTACAGTGAAGCTACTATAACAGAACGAGAAGAGCACTTCGGTGATTTGTACAGGG
TCAATTTTCCTATGAAGGCTTATGGACTGCCCCTTAATAGATCACATATACATCTAGTCCTTTGTCAGGAAACGGGAAAG
CTTAACAATCTCACTGTTAATATGCCTGTTTTCAAAGAAGATATCGATAAACCAGAGGATTTAATTGATATGGAAGAAGC
CTTGAAAACTTATCTGGAAGACACTGAAATTCAACCCTTCTATGGACATGAAGGAGAATTTTACTTTGAGTTTATTAATT
ACGATCATGATGCCATCAACGCTATCACCGGTGAGCTAGAAGGAAGGTCAAGGGCACAAATGTATACAGATCCCCTGGAG
ATCAACAATGCTGATAATGATAAGCTGATTGAATGGCTTCATGCAGTAAACGTGATTGTCCCTGAAGAAAGCCAGGTGAT
TGATGCCGAAAAAACAGTCACTAAAGGGGAAGCTGCTCGCTTAATTAAGTCTTTGACGGGTGAGGCCAGGGATCGCGTCC
CGCCATCCGGTGGGCACCGAGGATCCCATGATACGGAAGGCGATGTATTTACTGATGTGGAAAAGGACCATCCCGACTGT
GCTATCATTGAAGATATTTACGAACAGGGATTAATTCCTGAACAAATCCTTGCAGGTGAAGATGGGGATAAATTCAAACC
TGACCAAAATATTACCAGGGAAGAGTTGGCCACTATGCTAGTCAAGGCCATGAATTTACAGGAAGTGGCTGAACTGGATA
ATATGGAACTAGACTATCAAATTTCCGATCAGGAAGAGATCCATAATCAGACTGAAAATCATGTGCTCTTAACAGTGGGT
TTAGATATTATCTCCCTGAAAGATAGTGAATTTAGACCCCAGGAGTCTGTGACCAGAAACGAAATGGCCCAAGTTTTTGA
TAGATTGGTTGGATTAGGGAGGTTTGTACAATGA

Upstream 100 bases:

>100_bases
AACGTAAAAACTAATGTTGGGCTCTCTCCTGACCTTCATTAACCTGCTATTAGAAGAGGCCCTACAAATAAATAAAGCAA
GTTCCTAAGGAGGTATTATT

Downstream 100 bases:

>100_bases
GAAGAATAATAACTGTAAGCTCAAAGCTAAGCCCTAGAAATAACTCGAGACTGGGCTTAATCTTAGCCACCATGGCTATA
TGGTTGATCGTCGGTTCTTT

Product: S-layer domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 757; Mature: 757

Protein sequence:

>757_residues
MRLITVLLGATFLISSWLAPGLGETAVLKEAEPHPVIEAEQKDANLTEEEVIQLVEELIPTTQDLELERADFNDNFGRWQ
LGFETPQEVEDKYYSTNVYICDENKNLESFTMLMRELEVEDPKYVTHQKSEEIAREFLKRADYDLEELGEFELLTQEISP
SEKVHHYGTNLSHNFTFRQLYDGYGSNNEFTVYVSSRTGEVTRFLNNYDSDLEFEEVDHVIDKDKAEDLFIQAGAELEYD
IDYRNEKIDLQYSPIVGNDAKIDAETGEYLDFDGETKDLEEIKNSKPEVDLDMGALEIDRLDEPLDRRDQARLSNKVEEV
VSSAFDVEGEPSQTGSGGTLRSGPLEIERVSTDYQVEDPDVVLDVNIEKNRGYLNKIDVKPMTDDPLISVGDEEYSEQLA
QALTELAEDETEANFEQVAEKYLTKLTPEFLDYLDYSEATITEREEHFGDLYRVNFPMKAYGLPLNRSHIHLVLCQETGK
LNNLTVNMPVFKEDIDKPEDLIDMEEALKTYLEDTEIQPFYGHEGEFYFEFINYDHDAINAITGELEGRSRAQMYTDPLE
INNADNDKLIEWLHAVNVIVPEESQVIDAEKTVTKGEAARLIKSLTGEARDRVPPSGGHRGSHDTEGDVFTDVEKDHPDC
AIIEDIYEQGLIPEQILAGEDGDKFKPDQNITREELATMLVKAMNLQEVAELDNMELDYQISDQEEIHNQTENHVLLTVG
LDIISLKDSEFRPQESVTRNEMAQVFDRLVGLGRFVQ

Sequences:

>Translated_757_residues
MRLITVLLGATFLISSWLAPGLGETAVLKEAEPHPVIEAEQKDANLTEEEVIQLVEELIPTTQDLELERADFNDNFGRWQ
LGFETPQEVEDKYYSTNVYICDENKNLESFTMLMRELEVEDPKYVTHQKSEEIAREFLKRADYDLEELGEFELLTQEISP
SEKVHHYGTNLSHNFTFRQLYDGYGSNNEFTVYVSSRTGEVTRFLNNYDSDLEFEEVDHVIDKDKAEDLFIQAGAELEYD
IDYRNEKIDLQYSPIVGNDAKIDAETGEYLDFDGETKDLEEIKNSKPEVDLDMGALEIDRLDEPLDRRDQARLSNKVEEV
VSSAFDVEGEPSQTGSGGTLRSGPLEIERVSTDYQVEDPDVVLDVNIEKNRGYLNKIDVKPMTDDPLISVGDEEYSEQLA
QALTELAEDETEANFEQVAEKYLTKLTPEFLDYLDYSEATITEREEHFGDLYRVNFPMKAYGLPLNRSHIHLVLCQETGK
LNNLTVNMPVFKEDIDKPEDLIDMEEALKTYLEDTEIQPFYGHEGEFYFEFINYDHDAINAITGELEGRSRAQMYTDPLE
INNADNDKLIEWLHAVNVIVPEESQVIDAEKTVTKGEAARLIKSLTGEARDRVPPSGGHRGSHDTEGDVFTDVEKDHPDC
AIIEDIYEQGLIPEQILAGEDGDKFKPDQNITREELATMLVKAMNLQEVAELDNMELDYQISDQEEIHNQTENHVLLTVG
LDIISLKDSEFRPQESVTRNEMAQVFDRLVGLGRFVQ
>Mature_757_residues
MRLITVLLGATFLISSWLAPGLGETAVLKEAEPHPVIEAEQKDANLTEEEVIQLVEELIPTTQDLELERADFNDNFGRWQ
LGFETPQEVEDKYYSTNVYICDENKNLESFTMLMRELEVEDPKYVTHQKSEEIAREFLKRADYDLEELGEFELLTQEISP
SEKVHHYGTNLSHNFTFRQLYDGYGSNNEFTVYVSSRTGEVTRFLNNYDSDLEFEEVDHVIDKDKAEDLFIQAGAELEYD
IDYRNEKIDLQYSPIVGNDAKIDAETGEYLDFDGETKDLEEIKNSKPEVDLDMGALEIDRLDEPLDRRDQARLSNKVEEV
VSSAFDVEGEPSQTGSGGTLRSGPLEIERVSTDYQVEDPDVVLDVNIEKNRGYLNKIDVKPMTDDPLISVGDEEYSEQLA
QALTELAEDETEANFEQVAEKYLTKLTPEFLDYLDYSEATITEREEHFGDLYRVNFPMKAYGLPLNRSHIHLVLCQETGK
LNNLTVNMPVFKEDIDKPEDLIDMEEALKTYLEDTEIQPFYGHEGEFYFEFINYDHDAINAITGELEGRSRAQMYTDPLE
INNADNDKLIEWLHAVNVIVPEESQVIDAEKTVTKGEAARLIKSLTGEARDRVPPSGGHRGSHDTEGDVFTDVEKDHPDC
AIIEDIYEQGLIPEQILAGEDGDKFKPDQNITREELATMLVKAMNLQEVAELDNMELDYQISDQEEIHNQTENHVLLTVG
LDIISLKDSEFRPQESVTRNEMAQVFDRLVGLGRFVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86533; Mature: 86533

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLITVLLGATFLISSWLAPGLGETAVLKEAEPHPVIEAEQKDANLTEEEVIQLVEELIP
CHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCC
TTQDLELERADFNDNFGRWQLGFETPQEVEDKYYSTNVYICDENKNLESFTMLMRELEVE
CCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHEECEEEEECCCCCHHHHHHHHHHHCCC
DPKYVTHQKSEEIAREFLKRADYDLEELGEFELLTQEISPSEKVHHYGTNLSHNFTFRQL
CCCHHHCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCHHHHHCCCCCCCCCHHHHH
YDGYGSNNEFTVYVSSRTGEVTRFLNNYDSDLEFEEVDHVIDKDKAEDLFIQAGAELEYD
HCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEE
IDYRNEKIDLQYSPIVGNDAKIDAETGEYLDFDGETKDLEEIKNSKPEVDLDMGALEIDR
ECCCCCEEEEEECCCCCCCCEEECCCCCEECCCCCCHHHHHHHCCCCCEEECCCCEEHHH
LDEPLDRRDQARLSNKVEEVVSSAFDVEGEPSQTGSGGTLRSGPLEIERVSTDYQVEDPD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCC
VVLDVNIEKNRGYLNKIDVKPMTDDPLISVGDEEYSEQLAQALTELAEDETEANFEQVAE
EEEEEEEECCCCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCHHCCCHHHHHH
KYLTKLTPEFLDYLDYSEATITEREEHFGDLYRVNFPMKAYGLPLNRSHIHLVLCQETGK
HHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCEEEEEEECCCC
LNNLTVNMPVFKEDIDKPEDLIDMEEALKTYLEDTEIQPFYGHEGEFYFEFINYDHDAIN
CCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHH
AITGELEGRSRAQMYTDPLEINNADNDKLIEWLHAVNVIVPEESQVIDAEKTVTKGEAAR
HHHHCCCCCCCHHHCCCCEECCCCCHHHHHHHHHHHHEEECCCCCEECHHHHHHHHHHHH
LIKSLTGEARDRVPPSGGHRGSHDTEGDVFTDVEKDHPDCAIIEDIYEQGLIPEQILAGE
HHHHHHCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHCCC
DGDKFKPDQNITREELATMLVKAMNLQEVAELDNMELDYQISDQEEIHNQTENHVLLTVG
CCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCEEEEEECCHHHHHCCCCCEEEEEEC
LDIISLKDSEFRPQESVTRNEMAQVFDRLVGLGRFVQ
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLITVLLGATFLISSWLAPGLGETAVLKEAEPHPVIEAEQKDANLTEEEVIQLVEELIP
CHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCC
TTQDLELERADFNDNFGRWQLGFETPQEVEDKYYSTNVYICDENKNLESFTMLMRELEVE
CCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHEECEEEEECCCCCHHHHHHHHHHHCCC
DPKYVTHQKSEEIAREFLKRADYDLEELGEFELLTQEISPSEKVHHYGTNLSHNFTFRQL
CCCHHHCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCHHHHHCCCCCCCCCHHHHH
YDGYGSNNEFTVYVSSRTGEVTRFLNNYDSDLEFEEVDHVIDKDKAEDLFIQAGAELEYD
HCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEE
IDYRNEKIDLQYSPIVGNDAKIDAETGEYLDFDGETKDLEEIKNSKPEVDLDMGALEIDR
ECCCCCEEEEEECCCCCCCCEEECCCCCEECCCCCCHHHHHHHCCCCCEEECCCCEEHHH
LDEPLDRRDQARLSNKVEEVVSSAFDVEGEPSQTGSGGTLRSGPLEIERVSTDYQVEDPD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCC
VVLDVNIEKNRGYLNKIDVKPMTDDPLISVGDEEYSEQLAQALTELAEDETEANFEQVAE
EEEEEEEECCCCCEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCHHCCCHHHHHH
KYLTKLTPEFLDYLDYSEATITEREEHFGDLYRVNFPMKAYGLPLNRSHIHLVLCQETGK
HHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCEEEEEEECCCC
LNNLTVNMPVFKEDIDKPEDLIDMEEALKTYLEDTEIQPFYGHEGEFYFEFINYDHDAIN
CCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHH
AITGELEGRSRAQMYTDPLEINNADNDKLIEWLHAVNVIVPEESQVIDAEKTVTKGEAAR
HHHHCCCCCCCHHHCCCCEECCCCCHHHHHHHHHHHHEEECCCCCEECHHHHHHHHHHHH
LIKSLTGEARDRVPPSGGHRGSHDTEGDVFTDVEKDHPDCAIIEDIYEQGLIPEQILAGE
HHHHHHCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHCCC
DGDKFKPDQNITREELATMLVKAMNLQEVAELDNMELDYQISDQEEIHNQTENHVLLTVG
CCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCEEEEEECCHHHHHCCCCCEEEEEEC
LDIISLKDSEFRPQESVTRNEMAQVFDRLVGLGRFVQ
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA