Click here to switch to the map view.

The map label for this gene is 188586769

Identifier: 188586769

GI number: 188586769

Start: 2286130

End: 2287542

Strand: Reverse

Name: 188586769

Synonym: Nther_2160

Alternate gene names: NA

Gene position: 2287542-2286130 (Counterclockwise)

Preceding gene: 188586770

Following gene: 188586768

Centisome position: 72.26

GC content: 41.33

Gene sequence:

>1413_bases
ATGAGCAATTTAGTTGATCAGGTTAAATCTCAAATGCCACTAACTTTGGGTGAGCTAATTAATATAGCCCGAGAAAATAA
TAGCAGAGTAGTAGATGTGGTTTTGGCAGAAGCCGAGCTACAAACTAATAAATCTCAAGCTGAAATATTGGAAGACGCTT
TAGGCGAATTTGAACACAACTTGAAGGCTGTAGAAATTGGATTAACTTCTGGGGAAAGCTTACTATTTGGTACAGTAGGT
GATCAACTACTAGAAGCCGAGAAACAAGGAGCCAAGTTATTTGAAGATGATTTTATAAATGATATTCTGACAAATACTTT
AGCTGCCCAGGTTGGTAATCACACTATCGGTGTGGAACCATGTGCCGGAACAGGTGATTCATGCCCTTATACGGGGATCA
TAAAAGCCATGAAAGATCATGGTTATGATATTAAACGCGTTCAGGAAGTTGCCTGCGTTCTTTTGAAGGTAGGTTCCATG
TTCAGAGTTGGTAAAACCACAACGGGCTGTAATATGGAAGGCTTCGGTGCCGGTGCTGCTGCCAGCGCTGCCGCATTTGT
AGAAATAAAAGGTGGAAATCCTGATGAAATGGAAAAAGCAATGGTACTAGCTTTATCGCCCACCATCGCAAACCCATGTA
CTCCGAGAGTAATGGTACCGGGACTTTGTGCAACTCATATTGGAGGAGCTGTACTCTTGGGTAATATGTCTGCAGGTTTG
GCGATTAATACTAGCCTGGAAGTCAATGTGCCAGTGGACGTAATGATAGCTATGGCCAGTGAGGTTCATAAGATTTCTGC
CAAACACGTAGTACCTTCTGTCATCAAATTTATGGAGCCATTCTTTAAGACCAAAGCTCCTGTTGAACAGTTAATAGATC
AATCTATTAAAGATGAAGAAGAAACTAGAATAGAAGAAACTGGAAAAGAAGCTAAAGAAATAGCAAAAGGGTTGGCCAAA
GGGGCAAAACCCATTACTGAAACTTTAGGAGAAGCAGTTGTGGGAGGAAGCAGTCAGGCAGTTGGCTCACCAACCAATGC
TGGTAGAATAGCCCATTATTTAACCAATGGAAACATTAAAGGAGTGACTATTGAGCTATACCCTGAACTGTTTGCCAGAA
GGGGTATCAATGTTCCAGGGATATTAATGGGAGCTGTATTTGGTGCTTCCACCTCCGATTATGAAATGTATCAAAATGTC
ATGAAGAAAATAGAGTCCATGGGTATTGAAGTTGAAGTTAAGCAAAATGAAGAAAGTCAGATACAGCGCGTTACTATAGA
AACCGATGAAGGAAGCGCTATGGTAGATACCTTGAATCGTGGTGGTGGAAGATTAGTATTAAGAGATGCAACTCCTTCTT
TGGACAAGGCCAAACAAATAGCGGAAGACTTGGGCATAGTTCTGGTGGATTAA

Upstream 100 bases:

>100_bases
CTGCCAGATGTGAAGGTCTAGGAGACAGAGATATCTCTGCCATGATTAATATGTACGAAAAATGGACTGGAACAAAAGTC
AGAAAGGATGACGAGAAATA

Downstream 100 bases:

>100_bases
TAACATGACTAATTTAAACAATAAAATGATCAGGGAAAGAAGGTGAAACTTTCATGAATATCATTGAAAGATTAATAGCA
GAAAAAGCTGGTAGAGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MSNLVDQVKSQMPLTLGELINIARENNSRVVDVVLAEAELQTNKSQAEILEDALGEFEHNLKAVEIGLTSGESLLFGTVG
DQLLEAEKQGAKLFEDDFINDILTNTLAAQVGNHTIGVEPCAGTGDSCPYTGIIKAMKDHGYDIKRVQEVACVLLKVGSM
FRVGKTTTGCNMEGFGAGAAASAAAFVEIKGGNPDEMEKAMVLALSPTIANPCTPRVMVPGLCATHIGGAVLLGNMSAGL
AINTSLEVNVPVDVMIAMASEVHKISAKHVVPSVIKFMEPFFKTKAPVEQLIDQSIKDEEETRIEETGKEAKEIAKGLAK
GAKPITETLGEAVVGGSSQAVGSPTNAGRIAHYLTNGNIKGVTIELYPELFARRGINVPGILMGAVFGASTSDYEMYQNV
MKKIESMGIEVEVKQNEESQIQRVTIETDEGSAMVDTLNRGGGRLVLRDATPSLDKAKQIAEDLGIVLVD

Sequences:

>Translated_470_residues
MSNLVDQVKSQMPLTLGELINIARENNSRVVDVVLAEAELQTNKSQAEILEDALGEFEHNLKAVEIGLTSGESLLFGTVG
DQLLEAEKQGAKLFEDDFINDILTNTLAAQVGNHTIGVEPCAGTGDSCPYTGIIKAMKDHGYDIKRVQEVACVLLKVGSM
FRVGKTTTGCNMEGFGAGAAASAAAFVEIKGGNPDEMEKAMVLALSPTIANPCTPRVMVPGLCATHIGGAVLLGNMSAGL
AINTSLEVNVPVDVMIAMASEVHKISAKHVVPSVIKFMEPFFKTKAPVEQLIDQSIKDEEETRIEETGKEAKEIAKGLAK
GAKPITETLGEAVVGGSSQAVGSPTNAGRIAHYLTNGNIKGVTIELYPELFARRGINVPGILMGAVFGASTSDYEMYQNV
MKKIESMGIEVEVKQNEESQIQRVTIETDEGSAMVDTLNRGGGRLVLRDATPSLDKAKQIAEDLGIVLVD
>Mature_469_residues
SNLVDQVKSQMPLTLGELINIARENNSRVVDVVLAEAELQTNKSQAEILEDALGEFEHNLKAVEIGLTSGESLLFGTVGD
QLLEAEKQGAKLFEDDFINDILTNTLAAQVGNHTIGVEPCAGTGDSCPYTGIIKAMKDHGYDIKRVQEVACVLLKVGSMF
RVGKTTTGCNMEGFGAGAAASAAAFVEIKGGNPDEMEKAMVLALSPTIANPCTPRVMVPGLCATHIGGAVLLGNMSAGLA
INTSLEVNVPVDVMIAMASEVHKISAKHVVPSVIKFMEPFFKTKAPVEQLIDQSIKDEEETRIEETGKEAKEIAKGLAKG
AKPITETLGEAVVGGSSQAVGSPTNAGRIAHYLTNGNIKGVTIELYPELFARRGINVPGILMGAVFGASTSDYEMYQNVM
KKIESMGIEVEVKQNEESQIQRVTIETDEGSAMVDTLNRGGGRLVLRDATPSLDKAKQIAEDLGIVLVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49914; Mature: 49783

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLVDQVKSQMPLTLGELINIARENNSRVVDVVLAEAELQTNKSQAEILEDALGEFEHN
CCHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHCC
LKAVEIGLTSGESLLFGTVGDQLLEAEKQGAKLFEDDFINDILTNTLAAQVGNHTIGVEP
CEEEEEEECCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
CAGTGDSCPYTGIIKAMKDHGYDIKRVQEVACVLLKVGSMFRVGKTTTGCNMEGFGAGAA
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
ASAAAFVEIKGGNPDEMEKAMVLALSPTIANPCTPRVMVPGLCATHIGGAVLLGNMSAGL
CCCEEEEEEECCCHHHHHHEEEEEECCCCCCCCCCCEECCCHHHHHCCCEEEEECCCCCE
AINTSLEVNVPVDVMIAMASEVHKISAKHVVPSVIKFMEPFFKTKAPVEQLIDQSIKDEE
EEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH
ETRIEETGKEAKEIAKGLAKGAKPITETLGEAVVGGSSQAVGSPTNAGRIAHYLTNGNIK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEE
GVTIELYPELFARRGINVPGILMGAVFGASTSDYEMYQNVMKKIESMGIEVEVKQNEESQ
EEEEEECHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC
IQRVTIETDEGSAMVDTLNRGGGRLVLRDATPSLDKAKQIAEDLGIVLVD
EEEEEEECCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEC
>Mature Secondary Structure 
SNLVDQVKSQMPLTLGELINIARENNSRVVDVVLAEAELQTNKSQAEILEDALGEFEHN
CHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHCC
LKAVEIGLTSGESLLFGTVGDQLLEAEKQGAKLFEDDFINDILTNTLAAQVGNHTIGVEP
CEEEEEEECCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
CAGTGDSCPYTGIIKAMKDHGYDIKRVQEVACVLLKVGSMFRVGKTTTGCNMEGFGAGAA
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
ASAAAFVEIKGGNPDEMEKAMVLALSPTIANPCTPRVMVPGLCATHIGGAVLLGNMSAGL
CCCEEEEEEECCCHHHHHHEEEEEECCCCCCCCCCCEECCCHHHHHCCCEEEEECCCCCE
AINTSLEVNVPVDVMIAMASEVHKISAKHVVPSVIKFMEPFFKTKAPVEQLIDQSIKDEE
EEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH
ETRIEETGKEAKEIAKGLAKGAKPITETLGEAVVGGSSQAVGSPTNAGRIAHYLTNGNIK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEE
GVTIELYPELFARRGINVPGILMGAVFGASTSDYEMYQNVMKKIESMGIEVEVKQNEESQ
EEEEEECHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC
IQRVTIETDEGSAMVDTLNRGGGRLVLRDATPSLDKAKQIAEDLGIVLVD
EEEEEEECCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA