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The map label for this gene is yidA [H]

Identifier: 188586642

GI number: 188586642

Start: 2144314

End: 2145150

Strand: Reverse

Name: yidA [H]

Synonym: Nther_2032

Alternate gene names: 188586642

Gene position: 2145150-2144314 (Counterclockwise)

Preceding gene: 188586643

Following gene: 188586641

Centisome position: 67.77

GC content: 35.84

Gene sequence:

>837_bases
TTGTATCGCTTTGTTGCCATTGATATTGATGATACTTTGATTAATAATGAATTAGACATAACAGAAGCTAATAAAGAAAG
CATTAAAGCTGCCATTAATCATGGAGTATTGGTTACTCTGGCTACAGGGAGAATGTTTAAATCGGCATTACCTTATGCTA
AAGAACTAGGGCTAGATTTACCCTTAATAACTTATCACGGAGCTTTGATTAAGACCGCCGTTAAAGGTGAAGTTTTATAT
CATAAGCCTGTTCCTTTAGAAACCACCTTACAGGTAGTTCGTTTGGCTAAGGAAAAGGAGCTTCACTTAAACTTATACAT
TGATGATGAGTTGATTGTAGAAGAAGAAAATAAATATACTGATTATTATACAAAAATAGCAGGTGTATCTTTGAATCCGG
TGGGTGACTTGGAAAATTATTTAAAACAATATCCCCACAAAATACCTACTAAATTGACTGTAGTTGCCTCTGAACAAATG
GTGAAACGTTTGAATTATGAATTCAATCAGTTTTTTGGCCAAGATTTGCTAGTTACTGAATCTAAATCCGATTTCCTTGA
ACTAACTCATCCTGAAGCAAATAAAGGTGACGCTGTTGCAAAATTAGCTGAGATATATAATATTCCCCAGTCTAAAACTA
TGGCTATTGGGGATAGCCTGAATGATATTTCTATGATAAAAACAGCTGGAATGGGAGTGGCAGTTGAAAATGCCAGGTCC
AAGGTGAAGGATGTTGCTGATACCATTGTCAGTGCAAATGATGAAAGCGGAGTATCTGAAGCGATTGAAAGATTTGTTCT
GAGCGATTCTGGGAGGGAGATGAATGGAATTAACTAA

Upstream 100 bases:

>100_bases
CAAACAAGTCAAAAAATGATAAGATGAAAGCAGTTTGATTTAAACTGAGCTAATAAATTGCTTTTTGCTTTATAGTTGGA
TATTTAAGGAGGCGTTAAAC

Downstream 100 bases:

>100_bases
CATTAGAAAAAAAGCTAAAAATCGTCTTGCTGAATTTTGTAGCTCTTGTTGGGAATGCAATGGAGAAGTGTGTCGTGGCC
AAGTGCCTGGTATGGGTGGT

Product: Cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MYRFVAIDIDDTLINNELDITEANKESIKAAINHGVLVTLATGRMFKSALPYAKELGLDLPLITYHGALIKTAVKGEVLY
HKPVPLETTLQVVRLAKEKELHLNLYIDDELIVEEENKYTDYYTKIAGVSLNPVGDLENYLKQYPHKIPTKLTVVASEQM
VKRLNYEFNQFFGQDLLVTESKSDFLELTHPEANKGDAVAKLAEIYNIPQSKTMAIGDSLNDISMIKTAGMGVAVENARS
KVKDVADTIVSANDESGVSEAIERFVLSDSGREMNGIN

Sequences:

>Translated_278_residues
MYRFVAIDIDDTLINNELDITEANKESIKAAINHGVLVTLATGRMFKSALPYAKELGLDLPLITYHGALIKTAVKGEVLY
HKPVPLETTLQVVRLAKEKELHLNLYIDDELIVEEENKYTDYYTKIAGVSLNPVGDLENYLKQYPHKIPTKLTVVASEQM
VKRLNYEFNQFFGQDLLVTESKSDFLELTHPEANKGDAVAKLAEIYNIPQSKTMAIGDSLNDISMIKTAGMGVAVENARS
KVKDVADTIVSANDESGVSEAIERFVLSDSGREMNGIN
>Mature_278_residues
MYRFVAIDIDDTLINNELDITEANKESIKAAINHGVLVTLATGRMFKSALPYAKELGLDLPLITYHGALIKTAVKGEVLY
HKPVPLETTLQVVRLAKEKELHLNLYIDDELIVEEENKYTDYYTKIAGVSLNPVGDLENYLKQYPHKIPTKLTVVASEQM
VKRLNYEFNQFFGQDLLVTESKSDFLELTHPEANKGDAVAKLAEIYNIPQSKTMAIGDSLNDISMIKTAGMGVAVENARS
KVKDVADTIVSANDESGVSEAIERFVLSDSGREMNGIN

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=270, Percent_Identity=32.962962962963, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1786982, Length=287, Percent_Identity=25.0871080139373, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87081741, Length=250, Percent_Identity=23.2, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87081790, Length=272, Percent_Identity=19.8529411764706, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30868; Mature: 30868

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRFVAIDIDDTLINNELDITEANKESIKAAINHGVLVTLATGRMFKSALPYAKELGLDL
CEEEEEEECCHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHCCHHHHHCCCC
PLITYHGALIKTAVKGEVLYHKPVPLETTLQVVRLAKEKELHLNLYIDDELIVEEENKYT
CHHHHCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCHH
DYYTKIAGVSLNPVGDLENYLKQYPHKIPTKLTVVASEQMVKRLNYEFNQFFGQDLLVTE
HHHHHHCCCCCCCCHHHHHHHHHCCHHCCCEEEEEEHHHHHHHHCCHHHHHCCCCEEEEC
SKSDFLELTHPEANKGDAVAKLAEIYNIPQSKTMAIGDSLNDISMIKTAGMGVAVENARS
CCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCEEEHHHHH
KVKDVADTIVSANDESGVSEAIERFVLSDSGREMNGIN
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MYRFVAIDIDDTLINNELDITEANKESIKAAINHGVLVTLATGRMFKSALPYAKELGLDL
CEEEEEEECCHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHCCHHHHHCCCC
PLITYHGALIKTAVKGEVLYHKPVPLETTLQVVRLAKEKELHLNLYIDDELIVEEENKYT
CHHHHCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCHH
DYYTKIAGVSLNPVGDLENYLKQYPHKIPTKLTVVASEQMVKRLNYEFNQFFGQDLLVTE
HHHHHHCCCCCCCCHHHHHHHHHCCHHCCCEEEEEEHHHHHHHHCCHHHHHCCCCEEEEC
SKSDFLELTHPEANKGDAVAKLAEIYNIPQSKTMAIGDSLNDISMIKTAGMGVAVENARS
CCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCEEEHHHHH
KVKDVADTIVSANDESGVSEAIERFVLSDSGREMNGIN
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]