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The map label for this gene is ylxY [H]

Identifier: 188586077

GI number: 188586077

Start: 1519299

End: 1520312

Strand: Direct

Name: ylxY [H]

Synonym: Nther_1451

Alternate gene names: 188586077

Gene position: 1519299-1520312 (Clockwise)

Preceding gene: 188586076

Following gene: 188586078

Centisome position: 47.99

GC content: 35.01

Gene sequence:

>1014_bases
ATGTTTAATAAAATTTCTTTTAAAGTTTTAAAAATGAAAAAATTTTTTGTACTTGGTCTAATAGTCCTTATAGTATTACT
GGCATTATTAGTAATAGCTTATGACGGTATTGATGTCGATTTATCTACAAAAGATGCTCAACGTGTTAACCCAGGAGTGG
AGTTTTTAGGAGAAGATTTAAGTGACCTGACAAAGGAAGAGGTATTTACAATAGTATCTAAATACCAAGAAGATTTGTAT
CAAGAAGGTGAAGATGCCTACCTGGACCCGGTTACCAAGGGGGTTATCCCTGGATTGCCTGGAAAAGAACTAGATGTAGA
GAATACTGTAGAAAACATTATGCTGGCAGACAGTGAAACAACTGTACCACCTCAATTGAGCACAATTCCTCCAGATAAAA
CTATTCAAGATTATCAAGATGCTCCTATTTATCAGGGAAATCCCAAAAAAGATTATGCTGCTTTTATCTGCAATGTAGCA
TGGGGAACAGAATATATCGATGAGCTATTAAACTTATTAGAGGAACATCAAGTCAGGATTTCTTTTTTCTTAGAAGGACG
CTGGGCTGCCAATAATCCAGATAAAGTTGAACAAATACATGAATACGGGCATGAGATCGGTAATCACGGTTACAGTCATT
ATATGATGAGTGATTTAAATAGAGATAAGATTAGAGAAGAAATTGAAAAAACTAATCAGGAAATTTCTGAAATAACTGGC
ACAAAAGCTGAACTATTTGGCCCACCTGCAGGTGACTTTGATGAAGATGTTTTACGCGTTGCTAGTAATTTAGATATGTA
TACAATTCTTTGGTCCCTTGATACCATCGATTGGAAAGAACCTGGGGTAGATTATATGACGGATAAAATTTTAAACAATA
TCCATCCTGGTGCCATTATATTAATGCACCCAACTGAGGATACCGTTACAGCACTAGATGAAATTCTCACAGGATTGGAA
TCAAAAGAATATGAGGTGTTACCTGTATCTCAATTGATTAAAAACTATCAATAA

Upstream 100 bases:

>100_bases
ACATAAAAATAACTTAAACTCAGAATAGTGATAATAATAATACATATATATAGATTGAGCATGTTTCAAATCTCCTTTTT
GAGGAGGTTTTTTACTGTAA

Downstream 100 bases:

>100_bases
TTTTGCTTGAAGGTGGCGATATCTGGGATGTCTTTGAAAGGCAAACTAGGGATAATTGGAATATTAGTTTTAATTTTGAT
TATTATTCAAGTTCAATTTG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MFNKISFKVLKMKKFFVLGLIVLIVLLALLVIAYDGIDVDLSTKDAQRVNPGVEFLGEDLSDLTKEEVFTIVSKYQEDLY
QEGEDAYLDPVTKGVIPGLPGKELDVENTVENIMLADSETTVPPQLSTIPPDKTIQDYQDAPIYQGNPKKDYAAFICNVA
WGTEYIDELLNLLEEHQVRISFFLEGRWAANNPDKVEQIHEYGHEIGNHGYSHYMMSDLNRDKIREEIEKTNQEISEITG
TKAELFGPPAGDFDEDVLRVASNLDMYTILWSLDTIDWKEPGVDYMTDKILNNIHPGAIILMHPTEDTVTALDEILTGLE
SKEYEVLPVSQLIKNYQ

Sequences:

>Translated_337_residues
MFNKISFKVLKMKKFFVLGLIVLIVLLALLVIAYDGIDVDLSTKDAQRVNPGVEFLGEDLSDLTKEEVFTIVSKYQEDLY
QEGEDAYLDPVTKGVIPGLPGKELDVENTVENIMLADSETTVPPQLSTIPPDKTIQDYQDAPIYQGNPKKDYAAFICNVA
WGTEYIDELLNLLEEHQVRISFFLEGRWAANNPDKVEQIHEYGHEIGNHGYSHYMMSDLNRDKIREEIEKTNQEISEITG
TKAELFGPPAGDFDEDVLRVASNLDMYTILWSLDTIDWKEPGVDYMTDKILNNIHPGAIILMHPTEDTVTALDEILTGLE
SKEYEVLPVSQLIKNYQ
>Mature_337_residues
MFNKISFKVLKMKKFFVLGLIVLIVLLALLVIAYDGIDVDLSTKDAQRVNPGVEFLGEDLSDLTKEEVFTIVSKYQEDLY
QEGEDAYLDPVTKGVIPGLPGKELDVENTVENIMLADSETTVPPQLSTIPPDKTIQDYQDAPIYQGNPKKDYAAFICNVA
WGTEYIDELLNLLEEHQVRISFFLEGRWAANNPDKVEQIHEYGHEIGNHGYSHYMMSDLNRDKIREEIEKTNQEISEITG
TKAELFGPPAGDFDEDVLRVASNLDMYTILWSLDTIDWKEPGVDYMTDKILNNIHPGAIILMHPTEDTVTALDEILTGLE
SKEYEVLPVSQLIKNYQ

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=108, Percent_Identity=34.2592592592593, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 38196; Mature: 38196

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKISFKVLKMKKFFVLGLIVLIVLLALLVIAYDGIDVDLSTKDAQRVNPGVEFLGEDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHCCCHHHHHHHHH
SDLTKEEVFTIVSKYQEDLYQEGEDAYLDPVTKGVIPGLPGKELDVENTVENIMLADSET
HHHHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHCCCCCCCCCCCCHHHHHHHHEECCCCC
TVPPQLSTIPPDKTIQDYQDAPIYQGNPKKDYAAFICNVAWGTEYIDELLNLLEEHQVRI
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
SFFLEGRWAANNPDKVEQIHEYGHEIGNHGYSHYMMSDLNRDKIREEIEKTNQEISEITG
EEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
TKAELFGPPAGDFDEDVLRVASNLDMYTILWSLDTIDWKEPGVDYMTDKILNNIHPGAII
CCHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEE
LMHPTEDTVTALDEILTGLESKEYEVLPVSQLIKNYQ
EEECCCHHHHHHHHHHHCCCCCCEEEECHHHHHCCCC
>Mature Secondary Structure
MFNKISFKVLKMKKFFVLGLIVLIVLLALLVIAYDGIDVDLSTKDAQRVNPGVEFLGEDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHCCCHHHHHHHHH
SDLTKEEVFTIVSKYQEDLYQEGEDAYLDPVTKGVIPGLPGKELDVENTVENIMLADSET
HHHHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHCCCCCCCCCCCCHHHHHHHHEECCCCC
TVPPQLSTIPPDKTIQDYQDAPIYQGNPKKDYAAFICNVAWGTEYIDELLNLLEEHQVRI
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
SFFLEGRWAANNPDKVEQIHEYGHEIGNHGYSHYMMSDLNRDKIREEIEKTNQEISEITG
EEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
TKAELFGPPAGDFDEDVLRVASNLDMYTILWSLDTIDWKEPGVDYMTDKILNNIHPGAII
CCHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEE
LMHPTEDTVTALDEILTGLESKEYEVLPVSQLIKNYQ
EEECCCHHHHHHHHHHHCCCCCCEEEECHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]