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The map label for this gene is yoaR [H]

Identifier: 188586078

GI number: 188586078

Start: 1520340

End: 1521230

Strand: Direct

Name: yoaR [H]

Synonym: Nther_1452

Alternate gene names: 188586078

Gene position: 1520340-1521230 (Clockwise)

Preceding gene: 188586077

Following gene: 188586079

Centisome position: 48.03

GC content: 37.37

Gene sequence:

>891_bases
ATGTCTTTGAAAGGCAAACTAGGGATAATTGGAATATTAGTTTTAATTTTGATTATTATTCAAGTTCAATTTGATATAGT
TGATGATATCAGGCGGTATTTTGTTGGAGTAGAAAAAGATGTATATCTTGAAGAAAAAGATATCGGAAGATGGTATAAAC
ATGAAGTTGAAAAATACGTTGAAGAGTTGGCAGAACAAGAATATGAGCCCTACCGAGACGCCTATTTCGATCCGGAAACC
GATGAGATAGTTCCAGAAAAATTAGGTAAAAAAGTCTTGATAAAGGAAACTGTAGAGAAAGCCATGGAAGCACCTCCCGA
GTCTAAAGTAGAAGTTAAGTATTTGCCATTATATCCTTTAATAACAAAAGAGTTCTTATCATCTATAGATGAACCCATGG
CTAGCTTTGCAACTGGTCTAGGAGGCGGTGGTGGAGAAGGTAGAATTACAAATATAGAGATATCATCCCAAGATGTTAAC
AATACTTTGCTATTTCCGGGTCAAATTTTTTCTTTTAACAGAGCGACTCTACCGAGAACCTGGGAAAGAGGCTATAGATA
TGCACCAATTTTGGTAAATGATACTGCTATGGGTATAGGTGGGGGAGTTTGTCAGGTATCGAGCACAATTTACAATGTAG
CCTTGGAAGCAGATCTAGAAATTGTTGAAAGGCATCCTCATGGAAGTCCCGTAGACTACGTACCACCAGGTCGAGATGCT
ACAGTGGCCGGAGATTATCTAGACTTAAAGTTTAAAAATGATACTGAGCATGTCTTGCTTTTAACAGCTCATGTTAGCCA
GGGATTGGTAAAAGTTGATTTATACAAATCTCAAGAACCTTTTGCGTTAACTGTAATGAGACCTGTCCCCCTTGCTTTTA
ATAACAATTAA

Upstream 100 bases:

>100_bases
AATTCTCACAGGATTGGAATCAAAAGAATATGAGGTGTTACCTGTATCTCAATTGATTAAAAACTATCAATAATTTTGCT
TGAAGGTGGCGATATCTGGG

Downstream 100 bases:

>100_bases
TAATAAAATTACTATATTGGGAACCAATTTAGCCTTAGTTTATAAAGCGAGGGGGATCATAATGTTTGAAAAACACACTT
TACCAAACGGATTAAGAATT

Product: VanW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSLKGKLGIIGILVLILIIIQVQFDIVDDIRRYFVGVEKDVYLEEKDIGRWYKHEVEKYVEELAEQEYEPYRDAYFDPET
DEIVPEKLGKKVLIKETVEKAMEAPPESKVEVKYLPLYPLITKEFLSSIDEPMASFATGLGGGGGEGRITNIEISSQDVN
NTLLFPGQIFSFNRATLPRTWERGYRYAPILVNDTAMGIGGGVCQVSSTIYNVALEADLEIVERHPHGSPVDYVPPGRDA
TVAGDYLDLKFKNDTEHVLLLTAHVSQGLVKVDLYKSQEPFALTVMRPVPLAFNNN

Sequences:

>Translated_296_residues
MSLKGKLGIIGILVLILIIIQVQFDIVDDIRRYFVGVEKDVYLEEKDIGRWYKHEVEKYVEELAEQEYEPYRDAYFDPET
DEIVPEKLGKKVLIKETVEKAMEAPPESKVEVKYLPLYPLITKEFLSSIDEPMASFATGLGGGGGEGRITNIEISSQDVN
NTLLFPGQIFSFNRATLPRTWERGYRYAPILVNDTAMGIGGGVCQVSSTIYNVALEADLEIVERHPHGSPVDYVPPGRDA
TVAGDYLDLKFKNDTEHVLLLTAHVSQGLVKVDLYKSQEPFALTVMRPVPLAFNNN
>Mature_295_residues
SLKGKLGIIGILVLILIIIQVQFDIVDDIRRYFVGVEKDVYLEEKDIGRWYKHEVEKYVEELAEQEYEPYRDAYFDPETD
EIVPEKLGKKVLIKETVEKAMEAPPESKVEVKYLPLYPLITKEFLSSIDEPMASFATGLGGGGGEGRITNIEISSQDVNN
TLLFPGQIFSFNRATLPRTWERGYRYAPILVNDTAMGIGGGVCQVSSTIYNVALEADLEIVERHPHGSPVDYVPPGRDAT
VAGDYLDLKFKNDTEHVLLLTAHVSQGLVKVDLYKSQEPFALTVMRPVPLAFNNN

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 33228; Mature: 33097

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKGKLGIIGILVLILIIIQVQFDIVDDIRRYFVGVEKDVYLEEKDIGRWYKHEVEKYV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHH
EELAEQEYEPYRDAYFDPETDEIVPEKLGKKVLIKETVEKAMEAPPESKVEVKYLPLYPL
HHHHHHCCCCHHHCCCCCCCCCCCHHHCCCEEHHHHHHHHHHHCCCCCCEEEEEECCCHH
ITKEFLSSIDEPMASFATGLGGGGGEGRITNIEISSQDVNNTLLFPGQIFSFNRATLPRT
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEECCCEEECCCCCCCHH
WERGYRYAPILVNDTAMGIGGGVCQVSSTIYNVALEADLEIVERHPHGSPVDYVPPGRDA
HHCCCEECCEEEECCCCCCCCCHHHHHHHHHEEHHHCCHHHHHCCCCCCCCCCCCCCCCC
TVAGDYLDLKFKNDTEHVLLLTAHVSQGLVKVDLYKSQEPFALTVMRPVPLAFNNN
EEECCEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCEEECCC
>Mature Secondary Structure 
SLKGKLGIIGILVLILIIIQVQFDIVDDIRRYFVGVEKDVYLEEKDIGRWYKHEVEKYV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHH
EELAEQEYEPYRDAYFDPETDEIVPEKLGKKVLIKETVEKAMEAPPESKVEVKYLPLYPL
HHHHHHCCCCHHHCCCCCCCCCCCHHHCCCEEHHHHHHHHHHHCCCCCCEEEEEECCCHH
ITKEFLSSIDEPMASFATGLGGGGGEGRITNIEISSQDVNNTLLFPGQIFSFNRATLPRT
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEECCCEEECCCCCCCHH
WERGYRYAPILVNDTAMGIGGGVCQVSSTIYNVALEADLEIVERHPHGSPVDYVPPGRDA
HHCCCEECCEEEECCCCCCCCCHHHHHHHHHEEHHHCCHHHHHCCCCCCCCCCCCCCCCC
TVAGDYLDLKFKNDTEHVLLLTAHVSQGLVKVDLYKSQEPFALTVMRPVPLAFNNN
EEECCEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]