| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is yjiG [H]
Identifier: 188585409
GI number: 188585409
Start: 812012
End: 812497
Strand: Direct
Name: yjiG [H]
Synonym: Nther_0779
Alternate gene names: 188585409
Gene position: 812012-812497 (Clockwise)
Preceding gene: 188585408
Following gene: 188585410
Centisome position: 25.65
GC content: 38.48
Gene sequence:
>486_bases ATGGGAGCAAAACAAGAAACCAACGATGGCAGATTAGTAACACAGGTTTTTGTTGATGGTGCAAAGAAAGGTTGGAATGT TGGAGTATTTAACATGTTGCCAAATGTTGTTATGGCATTTGTAATCATACATGCTCTTAATATTGTTGGATTATTAGATC TACTTGGAAATGTGCTAGGACCGGTAATGGCGATTTTTGGAATACCGGGAGAAGGTGCGGCTGTTCTTGCTGGGGCCTGG TTATCAATGGGTGGAGGAATAGGCGTTGCAGCTAGCTTATTTGAACAAGGTGTATTAGATGGACAACACTTGGTAATCCT ATTTCCAGCTATTTTTCTTATGGGTTCTCAAATTCAATATGCCGGACGTTTATTAGGTACGGCTCAAGTTAATGCTAATC ACTGGCCAGTATTATTTGGGATTTGTATTTTAAATGGCTTGATTGCGATGTTAGTTATGAATTATTTAGCTTTACCTCTC TTTTAA
Upstream 100 bases:
>100_bases CTGTTCCAATGATCATACCTTTGGCAGTTATTTTCATTATGAAGTTTGTTGGAGCTAATTTAATGCGATTAAATTTGATG AGAGATAAGGGGGATGCTGA
Downstream 100 bases:
>100_bases AATGAATAATTATTTTCTTGTATCAAAATAGGGATGTGAAAGGAGTGTATTATGCTAACACTAATTAAAAATGCTCAACT TTACACACCGGAATATTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MGAKQETNDGRLVTQVFVDGAKKGWNVGVFNMLPNVVMAFVIIHALNIVGLLDLLGNVLGPVMAIFGIPGEGAAVLAGAW LSMGGGIGVAASLFEQGVLDGQHLVILFPAIFLMGSQIQYAGRLLGTAQVNANHWPVLFGICILNGLIAMLVMNYLALPL F
Sequences:
>Translated_161_residues MGAKQETNDGRLVTQVFVDGAKKGWNVGVFNMLPNVVMAFVIIHALNIVGLLDLLGNVLGPVMAIFGIPGEGAAVLAGAW LSMGGGIGVAASLFEQGVLDGQHLVILFPAIFLMGSQIQYAGRLLGTAQVNANHWPVLFGICILNGLIAMLVMNYLALPL F >Mature_160_residues GAKQETNDGRLVTQVFVDGAKKGWNVGVFNMLPNVVMAFVIIHALNIVGLLDLLGNVLGPVMAIFGIPGEGAAVLAGAWL SMGGGIGVAASLFEQGVLDGQHLVILFPAIFLMGSQIQYAGRLLGTAQVNANHWPVLFGICILNGLIAMLVMNYLALPLF
Specific function: Unknown
COG id: COG0700
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the spmB family [H]
Homologues:
Organism=Escherichia coli, GI1790785, Length=151, Percent_Identity=49.0066225165563, Blast_Score=154, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011642 [H]
Pfam domain/function: PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 16900; Mature: 16769
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAKQETNDGRLVTQVFVDGAKKGWNVGVFNMLPNVVMAFVIIHALNIVGLLDLLGNVLG CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVMAIFGIPGEGAAVLAGAWLSMGGGIGVAASLFEQGVLDGQHLVILFPAIFLMGSQIQY HHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHH AGRLLGTAQVNANHWPVLFGICILNGLIAMLVMNYLALPLF HHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GAKQETNDGRLVTQVFVDGAKKGWNVGVFNMLPNVVMAFVIIHALNIVGLLDLLGNVLG CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVMAIFGIPGEGAAVLAGAWLSMGGGIGVAASLFEQGVLDGQHLVILFPAIFLMGSQIQY HHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHH AGRLLGTAQVNANHWPVLFGICILNGLIAMLVMNYLALPLF HHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]