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The map label for this gene is yjiH [H]

Identifier: 188585408

GI number: 188585408

Start: 811353

End: 812048

Strand: Direct

Name: yjiH [H]

Synonym: Nther_0778

Alternate gene names: 188585408

Gene position: 811353-812048 (Clockwise)

Preceding gene: 188585407

Following gene: 188585409

Centisome position: 25.63

GC content: 39.66

Gene sequence:

>696_bases
ATGTCACAAGACAACAAAGTGGGAATAGGTGCTTATATAGCTCTAATTTTAGCAGTAATGTTTTTTTCCGGTATTTTTGG
AATGATTGATGGGCCAGAAGCACTGGGTCTATTAGATTTCTCAACTTTAAATGGTAGCTTTGGGGCCATTGAAAACGCTG
ATGGCTCAACAACCTTTCGAGGTGTTGAAGGTACAGGAGCAAGAGACGGATTTATGTTTGGTTTAAGTCTACTGCCAACA
GTGATATTTGCTTTGGCAATAGTAGAAATAGCTCAACATTACGGTGCTCTTGATGCCGCAAGGAAGCTTTTAACACCTCT
TTTAAAACCACTTCTTGGTTTGCCAGGAGCAGCTGGCCTTACATTAATTGCTAGTCTACAGAGTACTGATGCTGGTGGGG
CAATGACAAAGTCTCTTTCTGAAGCAGAAGAAATTACTCAAAAACAAAAAAGTGTTTTTGCATCCTTTCAGTTTTCAGCA
GGTGCAACAATCACAAATGTATTTGCCTCAGGCGCGATCTTATATGGGTTAACAATGTCTGATGGTAGTATGGCCATTAC
TGTTCCAATGATCATACCTTTGGCAGTTATTTTCATTATGAAGTTTGTTGGAGCTAATTTAATGCGATTAAATTTGATGA
GAGATAAGGGGGATGCTGAATGGGAGCAAAACAAGAAACCAACGATGGCAGATTAG

Upstream 100 bases:

>100_bases
ATTCTAACTACCAAGTTTTTCAAAACCAATTGGGGGAGGTGACCTTAGTAAATCTATCAAGTAGGACTAATTCAAATGTA
TATAATAGGGAGGTATTAAA

Downstream 100 bases:

>100_bases
TAACACAGGTTTTTGTTGATGGTGCAAAGAAAGGTTGGAATGTTGGAGTATTTAACATGTTGCCAAATGTTGTTATGGCA
TTTGTAATCATACATGCTCT

Product: nucleoside recognition domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSQDNKVGIGAYIALILAVMFFSGIFGMIDGPEALGLLDFSTLNGSFGAIENADGSTTFRGVEGTGARDGFMFGLSLLPT
VIFALAIVEIAQHYGALDAARKLLTPLLKPLLGLPGAAGLTLIASLQSTDAGGAMTKSLSEAEEITQKQKSVFASFQFSA
GATITNVFASGAILYGLTMSDGSMAITVPMIIPLAVIFIMKFVGANLMRLNLMRDKGDAEWEQNKKPTMAD

Sequences:

>Translated_231_residues
MSQDNKVGIGAYIALILAVMFFSGIFGMIDGPEALGLLDFSTLNGSFGAIENADGSTTFRGVEGTGARDGFMFGLSLLPT
VIFALAIVEIAQHYGALDAARKLLTPLLKPLLGLPGAAGLTLIASLQSTDAGGAMTKSLSEAEEITQKQKSVFASFQFSA
GATITNVFASGAILYGLTMSDGSMAITVPMIIPLAVIFIMKFVGANLMRLNLMRDKGDAEWEQNKKPTMAD
>Mature_230_residues
SQDNKVGIGAYIALILAVMFFSGIFGMIDGPEALGLLDFSTLNGSFGAIENADGSTTFRGVEGTGARDGFMFGLSLLPTV
IFALAIVEIAQHYGALDAARKLLTPLLKPLLGLPGAAGLTLIASLQSTDAGGAMTKSLSEAEEITQKQKSVFASFQFSAG
ATITNVFASGAILYGLTMSDGSMAITVPMIIPLAVIFIMKFVGANLMRLNLMRDKGDAEWEQNKKPTMAD

Specific function: Unknown

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082423, Length=225, Percent_Identity=46.2222222222222, Blast_Score=183, Evalue=9e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 24228; Mature: 24096

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDNKVGIGAYIALILAVMFFSGIFGMIDGPEALGLLDFSTLNGSFGAIENADGSTTFR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCEEEHHHCCCCCCCCCCCCCCCEEC
GVEGTGARDGFMFGLSLLPTVIFALAIVEIAQHYGALDAARKLLTPLLKPLLGLPGAAGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHH
TLIASLQSTDAGGAMTKSLSEAEEITQKQKSVFASFQFSAGATITNVFASGAILYGLTMS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEEEEC
DGSMAITVPMIIPLAVIFIMKFVGANLMRLNLMRDKGDAEWEQNKKPTMAD
CCCEEEHHHHHHHHHHHHHHHHHCCHHHEEEEHHCCCCCCHHCCCCCCCCC
>Mature Secondary Structure 
SQDNKVGIGAYIALILAVMFFSGIFGMIDGPEALGLLDFSTLNGSFGAIENADGSTTFR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCEEEHHHCCCCCCCCCCCCCCCEEC
GVEGTGARDGFMFGLSLLPTVIFALAIVEIAQHYGALDAARKLLTPLLKPLLGLPGAAGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHH
TLIASLQSTDAGGAMTKSLSEAEEITQKQKSVFASFQFSAGATITNVFASGAILYGLTMS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEEEEC
DGSMAITVPMIIPLAVIFIMKFVGANLMRLNLMRDKGDAEWEQNKKPTMAD
CCCEEEHHHHHHHHHHHHHHHHHCCHHHEEEEHHCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]