| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is ptxB [H]
Identifier: 188585288
GI number: 188585288
Start: 673878
End: 674873
Strand: Reverse
Name: ptxB [H]
Synonym: Nther_0650
Alternate gene names: 188585288
Gene position: 674873-673878 (Counterclockwise)
Preceding gene: 188585293
Following gene: 188585287
Centisome position: 21.32
GC content: 34.74
Gene sequence:
>996_bases TTGCCTGGCTTTCAAAAAAAGGTGTTTTTCGGAGTAGGTCTCTTATTATCCATCACAGTAATTGTTGGAATTTTCTTACC TTTTTACGAAAATTATCAATTACAGCAGTATCCTAAAGTGAATCTAACATCAAAGGATCAGAACCCTTCCGAATTTCAAG AAATAACTTCCCAAGATACAAAAGAATTTAACAAAGAGAGAGACAATGACTCTCATTTATTAAGAGTTGGCCTGGGAGCA ATAACAGCAGGTCGTGAATCCCTTTATTACTATAAAGAACTATTAGACCATTTAGAAGATCAGCTAGGGATGGAAGTTAA AATCCATCAAACTCGTACCCATTCAGAAATGAATGAATTAATACGCCATGGTAACATCGATATAGCATTCATTTGTTCTT ATTCTTACATTCAATTACAAGATAGCCATGGAGTGCCATTATTGGTCGTACCTGAGATAAATGGAACCACCACATATAGA TCTGTAATTCTAGCAAGAAAAGAGCTTAATATAGATGCTTTTAATCAATTGGAGAATAAAACTTTTGCTTTTACAGATCC CCTATCTAATGCAGGCAAACTATATCCTGCATATTTACTAAAACAACAAGGACAAAGTCCCCAGGATTTTTTTGAACACA GTTATTTCACATATAGCCACAATAATTCTGTAGATAGTGTGATAGAAGGGGTTGTGGATGCCGCTGCTGTTGATAGTCTT GTATATGACTACTTGTATACTAAAGATCCAGCTAGATTTGAAAATGTGGAAATAATTCATACTTCACCTGCTTTTGAAAT CTCACCTGTTGTGGCTAGTCCCAAATTAAAAACTTCATTAAAAGAAGATATTAAAAACTTTTTCTTGGAATTACATGAAA CTTCTAATGGTCAATATATATTGGAGCAATTGGGAATTGAGCAGTTTGAGCCCGCTCAAGATAGTAGCTATGACTCCATC AGAGATATGGCCGAGGTGGTAGGTTATGATAAATAA
Upstream 100 bases:
>100_bases CAAATTTAAATATGTAAGGGTTTATAGTAAAATATATTTAACACTTTAAGTGAGGATAAATTATCATTTATCTACTGATA TTAGAGTAGGGGGTATCGGA
Downstream 100 bases:
>100_bases AATTAAAAATAAAATTGGTATTAAAGAGAAAATAATAGCTATTGTAGTTATAATTGTATTAATGCTTGGGATTTGGACTG TAGTTCAAGTCAGGTCAACT
Product: phosphonate ABC transporter, periplasmic phosphonate-binding protein
Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MPGFQKKVFFGVGLLLSITVIVGIFLPFYENYQLQQYPKVNLTSKDQNPSEFQEITSQDTKEFNKERDNDSHLLRVGLGA ITAGRESLYYYKELLDHLEDQLGMEVKIHQTRTHSEMNELIRHGNIDIAFICSYSYIQLQDSHGVPLLVVPEINGTTTYR SVILARKELNIDAFNQLENKTFAFTDPLSNAGKLYPAYLLKQQGQSPQDFFEHSYFTYSHNNSVDSVIEGVVDAAAVDSL VYDYLYTKDPARFENVEIIHTSPAFEISPVVASPKLKTSLKEDIKNFFLELHETSNGQYILEQLGIEQFEPAQDSSYDSI RDMAEVVGYDK
Sequences:
>Translated_331_residues MPGFQKKVFFGVGLLLSITVIVGIFLPFYENYQLQQYPKVNLTSKDQNPSEFQEITSQDTKEFNKERDNDSHLLRVGLGA ITAGRESLYYYKELLDHLEDQLGMEVKIHQTRTHSEMNELIRHGNIDIAFICSYSYIQLQDSHGVPLLVVPEINGTTTYR SVILARKELNIDAFNQLENKTFAFTDPLSNAGKLYPAYLLKQQGQSPQDFFEHSYFTYSHNNSVDSVIEGVVDAAAVDSL VYDYLYTKDPARFENVEIIHTSPAFEISPVVASPKLKTSLKEDIKNFFLELHETSNGQYILEQLGIEQFEPAQDSSYDSI RDMAEVVGYDK >Mature_330_residues PGFQKKVFFGVGLLLSITVIVGIFLPFYENYQLQQYPKVNLTSKDQNPSEFQEITSQDTKEFNKERDNDSHLLRVGLGAI TAGRESLYYYKELLDHLEDQLGMEVKIHQTRTHSEMNELIRHGNIDIAFICSYSYIQLQDSHGVPLLVVPEINGTTTYRS VILARKELNIDAFNQLENKTFAFTDPLSNAGKLYPAYLLKQQGQSPQDFFEHSYFTYSHNNSVDSVIEGVVDAAAVDSLV YDYLYTKDPARFENVEIIHTSPAFEISPVVASPKLKTSLKEDIKNFFLELHETSNGQYILEQLGIEQFEPAQDSSYDSIR DMAEVVGYDK
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790543, Length=240, Percent_Identity=25.8333333333333, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 37758; Mature: 37627
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00088 SOD_MN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGFQKKVFFGVGLLLSITVIVGIFLPFYENYQLQQYPKVNLTSKDQNPSEFQEITSQDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH KEFNKERDNDSHLLRVGLGAITAGRESLYYYKELLDHLEDQLGMEVKIHQTRTHSEMNEL HHHHHCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHH IRHGNIDIAFICSYSYIQLQDSHGVPLLVVPEINGTTTYRSVILARKELNIDAFNQLENK HHHCCCCEEEEECCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCC TFAFTDPLSNAGKLYPAYLLKQQGQSPQDFFEHSYFTYSHNNSVDSVIEGVVDAAAVDSL EEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH VYDYLYTKDPARFENVEIIHTSPAFEISPVVASPKLKTSLKEDIKNFFLELHETSNGQYI HHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH LEQLGIEQFEPAQDSSYDSIRDMAEVVGYDK HHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure PGFQKKVFFGVGLLLSITVIVGIFLPFYENYQLQQYPKVNLTSKDQNPSEFQEITSQDT CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH KEFNKERDNDSHLLRVGLGAITAGRESLYYYKELLDHLEDQLGMEVKIHQTRTHSEMNEL HHHHHCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHH IRHGNIDIAFICSYSYIQLQDSHGVPLLVVPEINGTTTYRSVILARKELNIDAFNQLENK HHHCCCCEEEEECCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCC TFAFTDPLSNAGKLYPAYLLKQQGQSPQDFFEHSYFTYSHNNSVDSVIEGVVDAAAVDSL EEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH VYDYLYTKDPARFENVEIIHTSPAFEISPVVASPKLKTSLKEDIKNFFLELHETSNGQYI HHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH LEQLGIEQFEPAQDSSYDSIRDMAEVVGYDK HHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]