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The map label for this gene is yhcV [H]

Identifier: 188585293

GI number: 188585293

Start: 679370

End: 679798

Strand: Reverse

Name: yhcV [H]

Synonym: Nther_0656

Alternate gene names: 188585293

Gene position: 679798-679370 (Counterclockwise)

Preceding gene: 188585297

Following gene: 188585288

Centisome position: 21.47

GC content: 38.23

Gene sequence:

>429_bases
ATGAAAGTTAGAGATGTAATGACTTCTGAAATCTTTTCAGTTGACAAAGGTGAAAATGTCAGTCGGGCTGCTCAAATCAT
GAGGGAAACTAATATAGGTGTTTTATCAGTACACGACGGAGAAAACGTAGTGGGCATGTTAACAGATAGAGATATTGCTA
TTAGAAACGTAGCTTTAGAAAACAGTGTCAATGTACCTTGTGAAGAAGCCATGACAGCTGACGTCATTAGTTGTTCACCT
GAAAATTCTGTTGAAGAAGCAGCAGATATCATGGCTAAGTATCAAGTTAGACGATTACCTGTTATTGAAAATGGAAAACT
GGTGGGAATGGTAGCTTTAGGAGATTTAGCTACTGAAAACCAAACAAAAGACGAAGCTGGTCAAACTTTAAGTCAGGTTT
CTACACCTAGCAGGCCTGATTTATCCTAA

Upstream 100 bases:

>100_bases
TCCATATATTTTAATTTTTTAACAGCTTAGCCTGGTTATATTTATTAATAAACTGCACATTCTATAAATGATTTAATCTA
AAACTATTAGGAGGGTTTTA

Downstream 100 bases:

>100_bases
AATTCAAGTTTTAGCTAGCCATTTGTCTACAGTCTGAAATTAGCTCCTTTGAAACAAGGAGCTAATTTACTGTTGATTTA
GTTTCTTGAACTGATAATTT

Product: CBS domain containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKVRDVMTSEIFSVDKGENVSRAAQIMRETNIGVLSVHDGENVVGMLTDRDIAIRNVALENSVNVPCEEAMTADVISCSP
ENSVEEAADIMAKYQVRRLPVIENGKLVGMVALGDLATENQTKDEAGQTLSQVSTPSRPDLS

Sequences:

>Translated_142_residues
MKVRDVMTSEIFSVDKGENVSRAAQIMRETNIGVLSVHDGENVVGMLTDRDIAIRNVALENSVNVPCEEAMTADVISCSP
ENSVEEAADIMAKYQVRRLPVIENGKLVGMVALGDLATENQTKDEAGQTLSQVSTPSRPDLS
>Mature_142_residues
MKVRDVMTSEIFSVDKGENVSRAAQIMRETNIGVLSVHDGENVVGMLTDRDIAIRNVALENSVNVPCEEAMTADVISCSP
ENSVEEAADIMAKYQVRRLPVIENGKLVGMVALGDLATENQTKDEAGQTLSQVSTPSRPDLS

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 15335; Mature: 15335

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRDVMTSEIFSVDKGENVSRAAQIMRETNIGVLSVHDGENVVGMLTDRDIAIRNVALE
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCEEEEEEEEC
NSVNVPCEEAMTADVISCSPENSVEEAADIMAKYQVRRLPVIENGKLVGMVALGDLATEN
CCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCCC
QTKDEAGQTLSQVSTPSRPDLS
CCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKVRDVMTSEIFSVDKGENVSRAAQIMRETNIGVLSVHDGENVVGMLTDRDIAIRNVALE
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCEEEEEEEEC
NSVNVPCEEAMTADVISCSPENSVEEAADIMAKYQVRRLPVIENGKLVGMVALGDLATEN
CCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCCCCCC
QTKDEAGQTLSQVSTPSRPDLS
CCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]