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The map label for this gene is torD [H]

Identifier: 188585283

GI number: 188585283

Start: 668620

End: 669264

Strand: Direct

Name: torD [H]

Synonym: Nther_0645

Alternate gene names: 188585283

Gene position: 668620-669264 (Clockwise)

Preceding gene: 188585282

Following gene: 188585284

Centisome position: 21.12

GC content: 33.64

Gene sequence:

>645_bases
ATGACAATGCAAGAAGAAAATTCTTTGGCAAGATGGGCATTTTACGACTTTTTTAGTAAAGCTTTATATGAACCGGAAGA
AGATATGTTAAAACCTCAATTTTGTAAATTGATCCAAGAAGCTAACCAAGCTTTTCCCGCAGTTGAATTTTCTTTGATTG
ATAAATTTTGCAAAATAATTGATGAGCAAGATGGTCTACAAGAATTACTAGTCGAATATAGTAAATTATTTGTAGGGCCT
TCTAAGTTGCTGGCACCGCCCTATGAATCTTACTATCGCGATAGAGGAAGAGTTATGGGCGAAAGTACAATGAATGTAAA
AAAGTTTTACCAACAAGCAGGTATGGAAGTGCTACAGGAGATCAAAGAGCCACAAGATCATATTGCCATTGAGATGAACT
TTTTAGCCCAGTTGTATCGAATTCAAACACAATTGTTAAATTCAGGAGATAATGATAAAGCAGACCAAATTTTAACTCTG
GCAAAAGATTTTTATTTAAAACATCCGGCAACTTGGATCGATCAATTCACATACTTAGTCAAATCAGAAACTAAACATAG
TTTCTATTATTGTGTCGCAGAAATTTTAGAGTTATTTCACAAATATGAAATGAATTACTACAAAACAACCGTCTTCAGTT
GCTGA

Upstream 100 bases:

>100_bases
TTACATTAGAGATTACAATAAAAATGCTTAACAGTTATCCAAAAAAATAATAAAATAATGAAGTGAAAAAGAACTGTTTA
CAAAGGGGCGATAGTATATC

Downstream 100 bases:

>100_bases
AGGCGGTTGTTAACTATTGAAAGGGGATCAAAATGATTTCACCAGAAGAAGCATGTCAGAAGATTTATAATTTAATGCCT
GATAGAAACATAGAAAGTGT

Product: cytoplasmic chaperone TorD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTMQEENSLARWAFYDFFSKALYEPEEDMLKPQFCKLIQEANQAFPAVEFSLIDKFCKIIDEQDGLQELLVEYSKLFVGP
SKLLAPPYESYYRDRGRVMGESTMNVKKFYQQAGMEVLQEIKEPQDHIAIEMNFLAQLYRIQTQLLNSGDNDKADQILTL
AKDFYLKHPATWIDQFTYLVKSETKHSFYYCVAEILELFHKYEMNYYKTTVFSC

Sequences:

>Translated_214_residues
MTMQEENSLARWAFYDFFSKALYEPEEDMLKPQFCKLIQEANQAFPAVEFSLIDKFCKIIDEQDGLQELLVEYSKLFVGP
SKLLAPPYESYYRDRGRVMGESTMNVKKFYQQAGMEVLQEIKEPQDHIAIEMNFLAQLYRIQTQLLNSGDNDKADQILTL
AKDFYLKHPATWIDQFTYLVKSETKHSFYYCVAEILELFHKYEMNYYKTTVFSC
>Mature_213_residues
TMQEENSLARWAFYDFFSKALYEPEEDMLKPQFCKLIQEANQAFPAVEFSLIDKFCKIIDEQDGLQELLVEYSKLFVGPS
KLLAPPYESYYRDRGRVMGESTMNVKKFYQQAGMEVLQEIKEPQDHIAIEMNFLAQLYRIQTQLLNSGDNDKADQILTLA
KDFYLKHPATWIDQFTYLVKSETKHSFYYCVAEILELFHKYEMNYYKTTVFSC

Specific function: Involved in the biogenesis of torA. Acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor [H]

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. TorD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023069
- InterPro:   IPR020945 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 25309; Mature: 25178

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMQEENSLARWAFYDFFSKALYEPEEDMLKPQFCKLIQEANQAFPAVEFSLIDKFCKII
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DEQDGLQELLVEYSKLFVGPSKLLAPPYESYYRDRGRVMGESTMNVKKFYQQAGMEVLQE
CCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IKEPQDHIAIEMNFLAQLYRIQTQLLNSGDNDKADQILTLAKDFYLKHPATWIDQFTYLV
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KSETKHSFYYCVAEILELFHKYEMNYYKTTVFSC
HHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCC
>Mature Secondary Structure 
TMQEENSLARWAFYDFFSKALYEPEEDMLKPQFCKLIQEANQAFPAVEFSLIDKFCKII
CCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DEQDGLQELLVEYSKLFVGPSKLLAPPYESYYRDRGRVMGESTMNVKKFYQQAGMEVLQE
CCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IKEPQDHIAIEMNFLAQLYRIQTQLLNSGDNDKADQILTLAKDFYLKHPATWIDQFTYLV
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KSETKHSFYYCVAEILELFHKYEMNYYKTTVFSC
HHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA