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The map label for this gene is yacP [H]

Identifier: 188584817

GI number: 188584817

Start: 198860

End: 199372

Strand: Direct

Name: yacP [H]

Synonym: Nther_0175

Alternate gene names: 188584817

Gene position: 198860-199372 (Clockwise)

Preceding gene: 188584816

Following gene: 188584818

Centisome position: 6.28

GC content: 36.45

Gene sequence:

>513_bases
ATGACAGATTATTTAATTGTAGACGGTTATAATATTATTAATGCTTGGGACCATTTAAAAAAATCTGCCGAAGAAAATTT
AGAAATTAGTCGAATTGAACTAATAGACGAATTATCCGAGTACAAAGGGATTTTGTGGGGAAAGATCGTTGTGGTTTTCG
ATGCCCACTCAGCCAAGCAAAAAAACCGCCATACTGAACAAATCAATGGAATTTTGGTTATATACACTAAGGAAGGGGAA
ACGGCTGATAGTTTGATTGAGGCTTTAGTGTATGATTTGGTCGATAAAGGCAATGTTGATGTAGCCACCTCCGACTGGCA
AGAACAACGTGTAATTATGGGGAAAGGTGCTGTCCGACTTTCGGCTCGTGATTTAAAAAAGCTCATTAGGGAGACTAAGG
AAAAAATACGTAAAAATTTCATTGAAAAAGAAGAAGGTAAACGAAATACTCTCGATAATCTCCTCGATCAGCAAGTTAAA
GAGAAACTCAATATTCTTCGACATAAAAAGTGA

Upstream 100 bases:

>100_bases
ATTCCCTTAATGCAAGTGTAGCAACAGCTGTAGTGCTTTATGAAATATACCGCCAAAAAACTAATTAGTGAAGCATGAGC
CAGATCGGAGTGATATCTAA

Downstream 100 bases:

>100_bases
AAGTTCCTTCTTTAGCTTGACGGTATATTTTAATATGCGGTATAATATGTTTATGCATAGGGGGGCTTGTTTCCCGTAGA
AAACTAAAGCGGAGGCGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTDYLIVDGYNIINAWDHLKKSAEENLEISRIELIDELSEYKGILWGKIVVVFDAHSAKQKNRHTEQINGILVIYTKEGE
TADSLIEALVYDLVDKGNVDVATSDWQEQRVIMGKGAVRLSARDLKKLIRETKEKIRKNFIEKEEGKRNTLDNLLDQQVK
EKLNILRHKK

Sequences:

>Translated_170_residues
MTDYLIVDGYNIINAWDHLKKSAEENLEISRIELIDELSEYKGILWGKIVVVFDAHSAKQKNRHTEQINGILVIYTKEGE
TADSLIEALVYDLVDKGNVDVATSDWQEQRVIMGKGAVRLSARDLKKLIRETKEKIRKNFIEKEEGKRNTLDNLLDQQVK
EKLNILRHKK
>Mature_169_residues
TDYLIVDGYNIINAWDHLKKSAEENLEISRIELIDELSEYKGILWGKIVVVFDAHSAKQKNRHTEQINGILVIYTKEGET
ADSLIEALVYDLVDKGNVDVATSDWQEQRVIMGKGAVRLSARDLKKLIRETKEKIRKNFIEKEEGKRNTLDNLLDQQVKE
KLNILRHKK

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 19689; Mature: 19558

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDYLIVDGYNIINAWDHLKKSAEENLEISRIELIDELSEYKGILWGKIVVVFDAHSAKQ
CCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHEEEEEECCCHHHH
KNRHTEQINGILVIYTKEGETADSLIEALVYDLVDKGNVDVATSDWQEQRVIMGKGAVRL
HHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHCCCCCEEE
SARDLKKLIRETKEKIRKNFIEKEEGKRNTLDNLLDQQVKEKLNILRHKK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDYLIVDGYNIINAWDHLKKSAEENLEISRIELIDELSEYKGILWGKIVVVFDAHSAKQ
CCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHEEEEEECCCHHHH
KNRHTEQINGILVIYTKEGETADSLIEALVYDLVDKGNVDVATSDWQEQRVIMGKGAVRL
HHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHCCCCCEEE
SARDLKKLIRETKEKIRKNFIEKEEGKRNTLDNLLDQQVKEKLNILRHKK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]