Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528377

Identifier: 188528377

GI number: 188528377

Start: 1606736

End: 1606873

Strand: Reverse

Name: 188528377

Synonym: HPSH_08265

Alternate gene names: NA

Gene position: 1606873-1606736 (Counterclockwise)

Preceding gene: 188528378

Following gene: 188528372

Centisome position: 99.9

GC content: 29.71

Gene sequence:

>138_bases
ATGTCATACAAATACGATAGCGATTTGGAATTTTTAAAGCGATTAAGCTCTAGCGATTTGAAAGATTTGTTTGATGTGCT
TGTTTATGCCGAAGATAGTCAAAAAAGAGTTAATGAATACTTAACATATTCAGAATAA

Upstream 100 bases:

>100_bases
CTAATCACTAATCACTAATCACTAATCACTAATCACTAATCACTAAAAAGGGGGTTGGTGGGATTTGAGCGAGCGATAGA
AGTAAAATTAAAGGAATTGC

Downstream 100 bases:

>100_bases
TACAAAAAACATGGCGACAATTATGCTCAATACACAGAAAGGATCGCTGAAGAGTTGCAATACTATGGGGGCAATAGTTT
TGCGAATTTGTTTAGAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 45; Mature: 44

Protein sequence:

>45_residues
MSYKYDSDLEFLKRLSSSDLKDLFDVLVYAEDSQKRVNEYLTYSE

Sequences:

>Translated_45_residues
MSYKYDSDLEFLKRLSSSDLKDLFDVLVYAEDSQKRVNEYLTYSE
>Mature_44_residues
SYKYDSDLEFLKRLSSSDLKDLFDVLVYAEDSQKRVNEYLTYSE

Specific function: Unknown

COG id: COG4735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5405; Mature: 5274

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKYDSDLEFLKRLSSSDLKDLFDVLVYAEDSQKRVNEYLTYSE
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SYKYDSDLEFLKRLSSSDLKDLFDVLVYAEDSQKRVNEYLTYSE
CCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA