Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528378

Identifier: 188528378

GI number: 188528378

Start: 1607319

End: 1607459

Strand: Reverse

Name: 188528378

Synonym: HPSH_08270

Alternate gene names: NA

Gene position: 1607459-1607319 (Counterclockwise)

Preceding gene: 188528379

Following gene: 188528377

Centisome position: 99.93

GC content: 34.75

Gene sequence:

>141_bases
ATGAGTAACAGTTGCAGCAATCAAAACCACAATCAAAAAGGTGATGCTAAAAATCAAAACAACGAAAGTTGTCAAAAAAA
TAGCCAAAACCAAGCTAGTCAATGCAACGCTAACCACGAGCATAAAAACGACAAAAAGTAA

Upstream 100 bases:

>100_bases
AATAGAATCCATTTAAGCTTTTTTTTAGGGAAAAAGGTATAGAATGGGGACCTAGATGCGAAAATGCATCTAGTTTTTAT
TTTAATTTAAGGGAGACAAA

Downstream 100 bases:

>100_bases
GGGTTAGAGGGTTAAAGGAGGGGGTTTTTGTGCCAAAAATCAAAGTAGCGTTTCATTAAATTATGCCTAAAATTATACCT
AAAGAAGAAATCAATAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 45

Protein sequence:

>46_residues
MSNSCSNQNHNQKGDAKNQNNESCQKNSQNQASQCNANHEHKNDKK

Sequences:

>Translated_46_residues
MSNSCSNQNHNQKGDAKNQNNESCQKNSQNQASQCNANHEHKNDKK
>Mature_45_residues
SNSCSNQNHNQKGDAKNQNNESCQKNSQNQASQCNANHEHKNDKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5186; Mature: 5055

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSCSNQNHNQKGDAKNQNNESCQKNSQNQASQCNANHEHKNDKK
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SNSCSNQNHNQKGDAKNQNNESCQKNSQNQASQCNANHEHKNDKK
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA