| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is fbp [H]
Identifier: 188528324
GI number: 188528324
Start: 1555087
End: 1555959
Strand: Direct
Name: fbp [H]
Synonym: HPSH_07980
Alternate gene names: 188528324
Gene position: 1555087-1555959 (Clockwise)
Preceding gene: 188528321
Following gene: 188528325
Centisome position: 96.68
GC content: 38.49
Gene sequence:
>873_bases ATGGATTACAAACATTTTAAAGGCAAGCATGCAAACATCGTTATAGAAATCATTAGTCTTTTAGAAAAAGGGGTTAAAAA AGCCCAAGAGATTTTAGAAAAGCCGGACGCTGGGAGTTACACCAAGCTAGAAAACAGCAGCGGGGATACGCCCATTAAAG CGGATTTAGCCCTAGACAAATTTTTAGAAGAAAATTTTTTGAGTTTAGAAAATGTGAAAAGCGTTTTTAGCGAAGAAAAA GAAACGCCTGTTACTAAAGAAAACGGCTCTTATTTGATCGCTTATGACCCACTAGATGGGAGCTCAGTGATGGAGGCGAA TTTCTTAGTAGGCACGATTATAGGGGTTTATGAAAAGGATTATAAGGCGCAAAATTTAGCCGCCAGCCTTTATGTGGTTT TTGGGCATAAAATAGAACTGGTGGTGGCTTTAGAAGAAGTTTATCGTTACGGGTTTTACCAGAACAAGTTCCATTTTATA GAAACCATTGTTTTAGAAAATAAGGGTAAAATCATCGCTAGCGGAGGCAATCAAAAGGATTTTTCTTCGGGCTTAAAAAA GGCTTTAGAAGGGTTTTTTGCAGAAAATTACCGCTTACGATACTCAGGATCTATGGTGGCTGATGTCCATCATGTGTTGA TTAAAAAAGGCGGAATGTTTTCCTACCCGCAAAAGAAATTGCGCAAGCTTTTTGAAGTCTTTCCTTTAGCCTTGATGGTT GAAAAAGCTAAAGGGGAAGCGTTTTATTTTGATAAGGGGGTGAAAAAGCGCCTGCTAGAGCAAAGCGTAGAAAGCTACCA TGAAAAAAGCGAATGCTATTTAGCTAGCCAGCATGAAGCTCACATCTTAGAAAAATATTTAAAGGGAGAATGA
Upstream 100 bases:
>100_bases AGCGCTCAAAAGGCTCGGAGCTACTTTCAAAATACTTCCCTATTTCCAATGTTTTCAAGTAAAATATTAGCATCTTTAAT CAAATCATAAAAGGGTTTTT
Downstream 100 bases:
>100_bases TGCAAAATAGCGCTAAAAAATTAGAATATGAAGAGCGTTTTAATGACGCTCTTTTGAAATTGCAAGCATGCCAAGAAGAA AAACAAGTAGCGAGTTGCTT
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MDYKHFKGKHANIVIEIISLLEKGVKKAQEILEKPDAGSYTKLENSSGDTPIKADLALDKFLEENFLSLENVKSVFSEEK ETPVTKENGSYLIAYDPLDGSSVMEANFLVGTIIGVYEKDYKAQNLAASLYVVFGHKIELVVALEEVYRYGFYQNKFHFI ETIVLENKGKIIASGGNQKDFSSGLKKALEGFFAENYRLRYSGSMVADVHHVLIKKGGMFSYPQKKLRKLFEVFPLALMV EKAKGEAFYFDKGVKKRLLEQSVESYHEKSECYLASQHEAHILEKYLKGE
Sequences:
>Translated_290_residues MDYKHFKGKHANIVIEIISLLEKGVKKAQEILEKPDAGSYTKLENSSGDTPIKADLALDKFLEENFLSLENVKSVFSEEK ETPVTKENGSYLIAYDPLDGSSVMEANFLVGTIIGVYEKDYKAQNLAASLYVVFGHKIELVVALEEVYRYGFYQNKFHFI ETIVLENKGKIIASGGNQKDFSSGLKKALEGFFAENYRLRYSGSMVADVHHVLIKKGGMFSYPQKKLRKLFEVFPLALMV EKAKGEAFYFDKGVKKRLLEQSVESYHEKSECYLASQHEAHILEKYLKGE >Mature_290_residues MDYKHFKGKHANIVIEIISLLEKGVKKAQEILEKPDAGSYTKLENSSGDTPIKADLALDKFLEENFLSLENVKSVFSEEK ETPVTKENGSYLIAYDPLDGSSVMEANFLVGTIIGVYEKDYKAQNLAASLYVVFGHKIELVVALEEVYRYGFYQNKFHFI ETIVLENKGKIIASGGNQKDFSSGLKKALEGFFAENYRLRYSGSMVADVHHVLIKKGGMFSYPQKKLRKLFEVFPLALMV EKAKGEAFYFDKGVKKRLLEQSVESYHEKSECYLASQHEAHILEKYLKGE
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI189083692, Length=309, Percent_Identity=28.4789644012945, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI16579888, Length=309, Percent_Identity=28.4789644012945, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI22907028, Length=313, Percent_Identity=26.8370607028754, Blast_Score=72, Evalue=4e-13, Organism=Escherichia coli, GI1790679, Length=278, Percent_Identity=29.4964028776978, Blast_Score=91, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17508131, Length=321, Percent_Identity=26.4797507788162, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323409, Length=275, Percent_Identity=29.4545454545455, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI19921562, Length=231, Percent_Identity=29.8701298701299, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI45550998, Length=231, Percent_Identity=29.8701298701299, Blast_Score=78, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 - InterPro: IPR023079 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 32900; Mature: 32900
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYKHFKGKHANIVIEIISLLEKGVKKAQEILEKPDAGSYTKLENSSGDTPIKADLALDK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEHHHHHHH FLEENFLSLENVKSVFSEEKETPVTKENGSYLIAYDPLDGSSVMEANFLVGTIIGVYEKD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC YKAQNLAASLYVVFGHKIELVVALEEVYRYGFYQNKFHFIETIVLENKGKIIASGGNQKD HHHHHHHHHEEEEECCEEEEEHHHHHHHHHCCCCCHHHHHHEEEEECCCEEEECCCCCHH FSSGLKKALEGFFAENYRLRYSGSMVADVHHVLIKKGGMFSYPQKKLRKLFEVFPLALMV HHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH EKAKGEAFYFDKGVKKRLLEQSVESYHEKSECYLASQHEAHILEKYLKGE HHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHCCC >Mature Secondary Structure MDYKHFKGKHANIVIEIISLLEKGVKKAQEILEKPDAGSYTKLENSSGDTPIKADLALDK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEHHHHHHH FLEENFLSLENVKSVFSEEKETPVTKENGSYLIAYDPLDGSSVMEANFLVGTIIGVYEKD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC YKAQNLAASLYVVFGHKIELVVALEEVYRYGFYQNKFHFIETIVLENKGKIIASGGNQKD HHHHHHHHHEEEEECCEEEEEHHHHHHHHHCCCCCHHHHHHEEEEECCCEEEECCCCCHH FSSGLKKALEGFFAENYRLRYSGSMVADVHHVLIKKGGMFSYPQKKLRKLFEVFPLALMV HHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH EKAKGEAFYFDKGVKKRLLEQSVESYHEKSECYLASQHEAHILEKYLKGE HHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA