| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
Click here to switch to the map view.
The map label for this gene is 188528321
Identifier: 188528321
GI number: 188528321
Start: 1553351
End: 1553548
Strand: Direct
Name: 188528321
Synonym: HPSH_07965
Alternate gene names: NA
Gene position: 1553351-1553548 (Clockwise)
Preceding gene: 188528320
Following gene: 188528324
Centisome position: 96.57
GC content: 29.29
Gene sequence:
>198_bases ATGAGCATGGATAATAAAAACAACGATGAAGTCAATATCATACAAGAATACAAAAAGATATACGACGAGTGTGAAGTCCA AGATAAAATAAAAGTGCTAGGCAACATTCAGAAGTATCAAATGGATATGCTAAAGATAATCCGTAATCAAACCCAATTAA ACAATTTTCGTTTAACTAGTTGCTTTTATGATATTTAA
Upstream 100 bases:
>100_bases AAGCAAAAAAAATCCCCTATTGACTAGGGGACTTCTTTATTTAAAAAACAAACTATGCGGTTATTATAACACAATTTTTT ATTTTTGTTATAATGTAGAT
Downstream 100 bases:
>100_bases CAAACCCTTTGTCCTCTCAAAAAGAGAAAATGGCGGTGGAGTCTCTTGGTGTCTGGCTCTTGGAGGTCTTTTGATCAAGG TGTTAGCGCATTTGGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MSMDNKNNDEVNIIQEYKKIYDECEVQDKIKVLGNIQKYQMDMLKIIRNQTQLNNFRLTSCFYDI
Sequences:
>Translated_65_residues MSMDNKNNDEVNIIQEYKKIYDECEVQDKIKVLGNIQKYQMDMLKIIRNQTQLNNFRLTSCFYDI >Mature_64_residues SMDNKNNDEVNIIQEYKKIYDECEVQDKIKVLGNIQKYQMDMLKIIRNQTQLNNFRLTSCFYDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7883; Mature: 7752
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMDNKNNDEVNIIQEYKKIYDECEVQDKIKVLGNIQKYQMDMLKIIRNQTQLNNFRLTS CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEHHH CFYDI HCCCC >Mature Secondary Structure SMDNKNNDEVNIIQEYKKIYDECEVQDKIKVLGNIQKYQMDMLKIIRNQTQLNNFRLTS CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEHHH CFYDI HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA