| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188528325
Identifier: 188528325
GI number: 188528325
Start: 1555959
End: 1556162
Strand: Direct
Name: 188528325
Synonym: HPSH_07985
Alternate gene names: NA
Gene position: 1555959-1556162 (Clockwise)
Preceding gene: 188528324
Following gene: 188528326
Centisome position: 96.73
GC content: 40.2
Gene sequence:
>204_bases ATGCAAAATAGCGCTAAAAAATTAGAATATGAAGAGCGTTTTAATGACGCTCTTTTGAAATTGCAAGCATGCCAAGAAGA AAAACAAGTAGCGAGTTGCTTGAAATGCGAGAAGGTTTTGAATTGCGAGATCCGCAACAGCTATGTGAATGCGGCTTATG AGAGCATGAGTTTAGGCGAAGCGGGCGGGTTTGATTTCAATTAA
Upstream 100 bases:
>100_bases TGCTAGAGCAAAGCGTAGAAAGCTACCATGAAAAAAGCGAATGCTATTTAGCTAGCCAGCATGAAGCTCACATCTTAGAA AAATATTTAAAGGGAGAATG
Downstream 100 bases:
>100_bases AATGGGCTTAAAATGGTTAGTAACACTACCTTGCAAAAGAATTTAGACGCTTTTTACACCCACCCCAAAATCGCGCGATT TTGTTTGGATTTATTAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MQNSAKKLEYEERFNDALLKLQACQEEKQVASCLKCEKVLNCEIRNSYVNAAYESMSLGEAGGFDFN
Sequences:
>Translated_67_residues MQNSAKKLEYEERFNDALLKLQACQEEKQVASCLKCEKVLNCEIRNSYVNAAYESMSLGEAGGFDFN >Mature_67_residues MQNSAKKLEYEERFNDALLKLQACQEEKQVASCLKCEKVLNCEIRNSYVNAAYESMSLGEAGGFDFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7602; Mature: 7602
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNSAKKLEYEERFNDALLKLQACQEEKQVASCLKCEKVLNCEIRNSYVNAAYESMSLGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC AGGFDFN CCCCCCC >Mature Secondary Structure MQNSAKKLEYEERFNDALLKLQACQEEKQVASCLKCEKVLNCEIRNSYVNAAYESMSLGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC AGGFDFN CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA