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The map label for this gene is recN [H]

Identifier: 188528316

GI number: 188528316

Start: 1549040

End: 1550614

Strand: Direct

Name: recN [H]

Synonym: HPSH_07940

Alternate gene names: 188528316

Gene position: 1549040-1550614 (Clockwise)

Preceding gene: 188528315

Following gene: 188528317

Centisome position: 96.3

GC content: 39.3

Gene sequence:

>1575_bases
ATGCGAGATTTTAATAACGCTCAAATCACACGCTTAAAAGTGCGTCAAAACGCTGTTTTTGAAAAATTGGATCTAGAGTT
TAAAGACGGCTTGAGCGCGATTAGTGGGGCTAGTGGGGTGGGAAAAAGCGTTCTTATTGCGAGCCTTTTAGGGGCGTTTG
GGCTTAAAGAGAGCAACGCTTCAAACATTGAAGTGGAATTGATTGCGCCTTTTTTAGACACTGAAGAATACGGTATTTTT
AGAGAAGATGAGCATGAACCCTTAGTCATCAGCGTGATCAAAAAAGAAAAAACGCGCTATTTTTTAAACCAAACAAGCCT
GTCTAAAAACACGCTCAAAGCGTTATTAAAAGGTTTGATCAAACGCCTATCTAACGACAGATTCAGCCAGAATGAACTCA
ATGATACTTTAATGCTCTCCTTATTAGATGGCTATATCCAAAACCAAAATAAGGCGTTTAACCCCCTTTTAGGCGCGCTT
GAAGAAAAATTCACCCGTTTAGAGAAGCTAGAAAAAGAAAGGCGATTATTAGAGGATAAAAAGCGTTTCCAAAAGGATTT
AGAAGAGCGTTTGAATTTTGAAAAAATGAAATTAGAGAAACTGGATTTAAAAGAAGATGAATACGAACGCCTTTTAGAGC
AAAAAAAATTGCTTTCCAGTAAGGAAAAATTGAACGATAAAATCGCTCTGGCGTTAGAGGTGCTAGAAAATACCCACAAA
ATCACGCATGCTTTAGAGAGTGTGGGCCATAGCGCTGAATTTTTAAAAAGCGCTTTATTAGAAGCGAGCGCTCTATTGGA
AAAAGAGCAGGCTAAATTAGAAGAGTGCGAGCGTTTGGATATTGAAAAAGTGCTAGAAAGGCTTGGCATGCTAAGCGGGG
TCATTAAGGATTACGGGAGCATTACGCATGCTAAAGAACGATTAGGGCATGTTAAAAACGAATTGCATAACCTAAAAGAA
ATTGATAATCATTGCGAAACTTACCACAAAGAAATAGAGCAACTAAAAACCGAATGCTTGAAATTGTGCGAAGAAATAAG
CGGCTTTAGAAAAGAGTATTTAGCCGGTTTTAACGCTCTTTTAAGCGCTAAAGCGAAAGATTTGCTCCTAAAAAGCCCCA
GTTTGGTTTTAGAAGAAGCCCCCATGAGCGAAAAAGGCGCTCAAAAACTCGTTTTGAATTTGCAAAATTCCCAATTAGAA
ATCTTAAGCTCTGGAGAATACAGCCGTTTGAGGTTGGCGTTCATGCTTTTAGAAATGGAGTTTTTAAAGGATTTTAAAGG
CGTCTTGGTGTTAGATGAAATGGATTCTAATTTGAGCGGCGAAGAGAGTTTGGCGGTTTCTAAAGCCCTTGAAACCTTAA
GCAGCCATTCCCAAATCTTTGCCATTTCGCACCAAGTCCATATCCCAGCGCTCGCTAAAAACCATATTTTAGTCTTCAAA
GAAAACCACAAAAGCCTCGCCAAAACCCTTAATAACGAAGAAAGGGTTTTAGAAATCGCGCGCATGATAGGGGGGAGCGA
GAATATAGAGAGCGCGATTTCTTTCGCTAAAGAAAAATTAAAGGCGCAAGAATGA

Upstream 100 bases:

>100_bases
CAAGCTCTTACAAAAAAATTCAAGGGATTATTTTAAAGTGCTTAAAGAAAAGCTCTTATGGGGAGAAAGCCCTAGCAAAA
AAAGATAAAAAGGGTAAAAC

Downstream 100 bases:

>100_bases
AATTTTTTCTTTTAAAGAAATTCAGCGAATTTTTAAACGCTCAAACGCATTTTAACCTCAAACGCTTGAGCGCATCTGGT
TTTTTATTAGAGACTTTTTC

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLLGAFGLKESNASNIEVELIAPFLDTEEYGIF
REDEHEPLVISVIKKEKTRYFLNQTSLSKNTLKALLKGLIKRLSNDRFSQNELNDTLMLSLLDGYIQNQNKAFNPLLGAL
EEKFTRLEKLEKERRLLEDKKRFQKDLEERLNFEKMKLEKLDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHK
ITHALESVGHSAEFLKSALLEASALLEKEQAKLEECERLDIEKVLERLGMLSGVIKDYGSITHAKERLGHVKNELHNLKE
IDNHCETYHKEIEQLKTECLKLCEEISGFRKEYLAGFNALLSAKAKDLLLKSPSLVLEEAPMSEKGAQKLVLNLQNSQLE
ILSSGEYSRLRLAFMLLEMEFLKDFKGVLVLDEMDSNLSGEESLAVSKALETLSSHSQIFAISHQVHIPALAKNHILVFK
ENHKSLAKTLNNEERVLEIARMIGGSENIESAISFAKEKLKAQE

Sequences:

>Translated_524_residues
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLLGAFGLKESNASNIEVELIAPFLDTEEYGIF
REDEHEPLVISVIKKEKTRYFLNQTSLSKNTLKALLKGLIKRLSNDRFSQNELNDTLMLSLLDGYIQNQNKAFNPLLGAL
EEKFTRLEKLEKERRLLEDKKRFQKDLEERLNFEKMKLEKLDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHK
ITHALESVGHSAEFLKSALLEASALLEKEQAKLEECERLDIEKVLERLGMLSGVIKDYGSITHAKERLGHVKNELHNLKE
IDNHCETYHKEIEQLKTECLKLCEEISGFRKEYLAGFNALLSAKAKDLLLKSPSLVLEEAPMSEKGAQKLVLNLQNSQLE
ILSSGEYSRLRLAFMLLEMEFLKDFKGVLVLDEMDSNLSGEESLAVSKALETLSSHSQIFAISHQVHIPALAKNHILVFK
ENHKSLAKTLNNEERVLEIARMIGGSENIESAISFAKEKLKAQE
>Mature_524_residues
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLLGAFGLKESNASNIEVELIAPFLDTEEYGIF
REDEHEPLVISVIKKEKTRYFLNQTSLSKNTLKALLKGLIKRLSNDRFSQNELNDTLMLSLLDGYIQNQNKAFNPLLGAL
EEKFTRLEKLEKERRLLEDKKRFQKDLEERLNFEKMKLEKLDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHK
ITHALESVGHSAEFLKSALLEASALLEKEQAKLEECERLDIEKVLERLGMLSGVIKDYGSITHAKERLGHVKNELHNLKE
IDNHCETYHKEIEQLKTECLKLCEEISGFRKEYLAGFNALLSAKAKDLLLKSPSLVLEEAPMSEKGAQKLVLNLQNSQLE
ILSSGEYSRLRLAFMLLEMEFLKDFKGVLVLDEMDSNLSGEESLAVSKALETLSSHSQIFAISHQVHIPALAKNHILVFK
ENHKSLAKTLNNEERVLEIARMIGGSENIESAISFAKEKLKAQE

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=571, Percent_Identity=22.7670753064799, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59532; Mature: 59532

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLLGAFGLKESNA
CCCCCCCCEEEEHHHHHHHHHHHCCHHHHCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
SNIEVELIAPFLDTEEYGIFREDEHEPLVISVIKKEKTRYFLNQTSLSKNTLKALLKGLI
CCEEEEEEECHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KRLSNDRFSQNELNDTLMLSLLDGYIQNQNKAFNPLLGALEEKFTRLEKLEKERRLLEDK
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRFQKDLEERLNFEKMKLEKLDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHK
HHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITHALESVGHSAEFLKSALLEASALLEKEQAKLEECERLDIEKVLERLGMLSGVIKDYGS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ITHAKERLGHVKNELHNLKEIDNHCETYHKEIEQLKTECLKLCEEISGFRKEYLAGFNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAKAKDLLLKSPSLVLEEAPMSEKGAQKLVLNLQNSQLEILSSGEYSRLRLAFMLLEME
HHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCCCCEEHCCCCCHHHHHHHHHHHHHH
FLKDFKGVLVLDEMDSNLSGEESLAVSKALETLSSHSQIFAISHQVHIPALAKNHILVFK
HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECEEECCCCCCCCEEEEE
ENHKSLAKTLNNEERVLEIARMIGGSENIESAISFAKEKLKAQE
CCHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLLGAFGLKESNA
CCCCCCCCEEEEHHHHHHHHHHHCCHHHHCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
SNIEVELIAPFLDTEEYGIFREDEHEPLVISVIKKEKTRYFLNQTSLSKNTLKALLKGLI
CCEEEEEEECHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KRLSNDRFSQNELNDTLMLSLLDGYIQNQNKAFNPLLGALEEKFTRLEKLEKERRLLEDK
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRFQKDLEERLNFEKMKLEKLDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHK
HHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITHALESVGHSAEFLKSALLEASALLEKEQAKLEECERLDIEKVLERLGMLSGVIKDYGS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ITHAKERLGHVKNELHNLKEIDNHCETYHKEIEQLKTECLKLCEEISGFRKEYLAGFNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAKAKDLLLKSPSLVLEEAPMSEKGAQKLVLNLQNSQLEILSSGEYSRLRLAFMLLEME
HHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCCCCEEHCCCCCHHHHHHHHHHHHHH
FLKDFKGVLVLDEMDSNLSGEESLAVSKALETLSSHSQIFAISHQVHIPALAKNHILVFK
HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECEEECCCCCCCCEEEEE
ENHKSLAKTLNNEERVLEIARMIGGSENIESAISFAKEKLKAQE
CCHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]