| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188528112
Identifier: 188528112
GI number: 188528112
Start: 1330540
End: 1330770
Strand: Reverse
Name: 188528112
Synonym: HPSH_06845
Alternate gene names: NA
Gene position: 1330770-1330540 (Counterclockwise)
Preceding gene: 188528113
Following gene: 188528111
Centisome position: 82.73
GC content: 37.23
Gene sequence:
>231_bases ATGAAAAAAGATATTCGTAAGATTTTAAAAGAAGCATTGCATGACAATAAAGATTTGAATCTTTATTTGGAATCTGGAGG CAAGCATGCCAAGCTGACTGGTGGGGCGTATTCTTTGACGATCCCTTCATCGCCAAGCGACAGAAAAAGCGTGAAAAACT TTGAAAAAGAATTAACAGAGTTTATTAAGAAGCTAAGAGAAAACGAGATAACGCATGAAGCGCATGAGTAG
Upstream 100 bases:
>100_bases TTGGAATTGAAACTCTTGAGCGCTGAAGATTTTGACAAATTCGTAGTTCCTGAAAAGATGATCGGGCCTAAGGCTTGAAA ATCTTGAGTGGGCGCATGAG
Downstream 100 bases:
>100_bases GAATTTTTATACCGGTTTGGTTGCGTATCAATGATTTTAGGCATTGATGAAGCGGGGAGAGGGTGTTTGGCCGGGTCGCT TTTTGTGGCTGGGGTGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MKKDIRKILKEALHDNKDLNLYLESGGKHAKLTGGAYSLTIPSSPSDRKSVKNFEKELTEFIKKLRENEITHEAHE
Sequences:
>Translated_76_residues MKKDIRKILKEALHDNKDLNLYLESGGKHAKLTGGAYSLTIPSSPSDRKSVKNFEKELTEFIKKLRENEITHEAHE >Mature_76_residues MKKDIRKILKEALHDNKDLNLYLESGGKHAKLTGGAYSLTIPSSPSDRKSVKNFEKELTEFIKKLRENEITHEAHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8721; Mature: 8721
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDIRKILKEALHDNKDLNLYLESGGKHAKLTGGAYSLTIPSSPSDRKSVKNFEKELTE CCHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHH FIKKLRENEITHEAHE HHHHHHHCCCCCCCCC >Mature Secondary Structure MKKDIRKILKEALHDNKDLNLYLESGGKHAKLTGGAYSLTIPSSPSDRKSVKNFEKELTE CCHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHH FIKKLRENEITHEAHE HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA