| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is cheV [H]
Identifier: 188527842
GI number: 188527842
Start: 1074715
End: 1075650
Strand: Direct
Name: cheV [H]
Synonym: HPSH_05440
Alternate gene names: 188527842
Gene position: 1074715-1075650 (Clockwise)
Preceding gene: 188527841
Following gene: 188527843
Centisome position: 66.81
GC content: 38.68
Gene sequence:
>936_bases ATGGCAGAAAAAACAGCTAACGATTTAAAATTGAGCGAGATAGAACTCGTGGATTTTCGCATTTATGGCATGCAAGAGGG CGTCCCTTATGAGGGGATTTATGGCATCAATGTGGCTAAAGTTCAAGAAATCATCCCCATGCCCACCCTTTTTGAATACC CTACGAATTTGGATTACATTATCGGCGTGTTTGATTTGCGATCCACGATCATTCCGCTTATAGACTTGGCCAAATGGATA GGGATTGTCCCGGATAAAAGCAAGGAAAACGAAAAAATCGTCATTATCACTGAATTTAACAATGTTAAAATGGGCTTTTT AGTCCATTCCGCTAGGCGTATCAGGCGCATTAGTTGGAAAGATGTGGAGCCTGCATCCTTTAGCGCATCTAACAGCATCA ATAAAGAAAATATCACCGGCACGACCCGCATTGAAAACGACAAAACCCTGCTCATTTTGGATTTGGAAAGCATTTTAGAC GATTTAAAGCTTAATGAAGACGCTAAAAACGCTAAAGATACCCCTAAAGAGCGTTTTGAAGGCGAAGTGTTGTTTTTAGA CGATAGCAAGACCGCAAGAAAAACCTTAAAGAACCATTTGAGTAAATTGGGTTTTAGCATCACTGAAGCTGTGGATGGGG AAGATGGGTTGGATAAATTAGAAATGTTATTCAAAAAATACGGGGATAATTTGAGGAAACATTTGAAATTCATTATTTCA GATGTTGAAATGCCTAAAATGGATGGCTATCATTTCTTATTCAAGCTCCAAAAAGACCCCAGGTTTGCCTATATTCCTGT GATTTTTAATTCTTCTATTTGCGATAATTATAGCGCTGAAAGGGCCAAAGAAATGGGGGCTGTAGCGTATTTAGTCAAGT TTGACGCAGAAAAATTCACCGAAGAAATTTCTAAGATTTTAGACAAGAATGCATAA
Upstream 100 bases:
>100_bases GCCTATTTATTGCCCACTGCCTTCCTTTTATTACGAACAAAGCCTTTTTAAGGTATCATCAAGCATTTTAGAACCATCTC AAAATAAGGACGCCTAAATC
Downstream 100 bases:
>100_bases TTCTTTTTATAAAATTGTAAAATACTCTTATCTCAAACGCTAAAAAGGGGTTTTAAAATGGATGATTTGCAAGAAATAAT GGAAGACTTCTTGATTGAAG
Product: CheA-MCP interaction modulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYIIGVFDLRSTIIPLIDLAKWI GIVPDKSKENEKIVIITEFNNVKMGFLVHSARRIRRISWKDVEPASFSASNSINKENITGTTRIENDKTLLILDLESILD DLKLNEDAKNAKDTPKERFEGEVLFLDDSKTARKTLKNHLSKLGFSITEAVDGEDGLDKLEMLFKKYGDNLRKHLKFIIS DVEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVKFDAEKFTEEISKILDKNA
Sequences:
>Translated_311_residues MAEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYIIGVFDLRSTIIPLIDLAKWI GIVPDKSKENEKIVIITEFNNVKMGFLVHSARRIRRISWKDVEPASFSASNSINKENITGTTRIENDKTLLILDLESILD DLKLNEDAKNAKDTPKERFEGEVLFLDDSKTARKTLKNHLSKLGFSITEAVDGEDGLDKLEMLFKKYGDNLRKHLKFIIS DVEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVKFDAEKFTEEISKILDKNA >Mature_310_residues AEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYIIGVFDLRSTIIPLIDLAKWIG IVPDKSKENEKIVIITEFNNVKMGFLVHSARRIRRISWKDVEPASFSASNSINKENITGTTRIENDKTLLILDLESILDD LKLNEDAKNAKDTPKERFEGEVLFLDDSKTARKTLKNHLSKLGFSITEAVDGEDGLDKLEMLFKKYGDNLRKHLKFIISD VEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVKFDAEKFTEEISKILDKNA
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=128, Percent_Identity=35.15625, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 35564; Mature: 35433
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYI CCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCEECCHHHHHHHHCCCCCHHCCCCCCHHE IGVFDLRSTIIPLIDLAKWIGIVPDKSKENEKIVIITEFNNVKMGFLVHSARRIRRISWK EEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCC DVEPASFSASNSINKENITGTTRIENDKTLLILDLESILDDLKLNEDAKNAKDTPKERFE CCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHC GEVLFLDDSKTARKTLKNHLSKLGFSITEAVDGEDGLDKLEMLFKKYGDNLRKHLKFIIS CCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHH DVEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVKFDAEKFT HCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHEEEEEEHHHHHHH EEISKILDKNA HHHHHHHCCCC >Mature Secondary Structure AEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYI CCCCCCCCEEEEEEEEEEEEEECCCCCCCCCEECCHHHHHHHHCCCCCHHCCCCCCHHE IGVFDLRSTIIPLIDLAKWIGIVPDKSKENEKIVIITEFNNVKMGFLVHSARRIRRISWK EEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCC DVEPASFSASNSINKENITGTTRIENDKTLLILDLESILDDLKLNEDAKNAKDTPKERFE CCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHC GEVLFLDDSKTARKTLKNHLSKLGFSITEAVDGEDGLDKLEMLFKKYGDNLRKHLKFIIS CCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHH DVEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVKFDAEKFT HCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHEEEEEEHHHHHHH EEISKILDKNA HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]