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The map label for this gene is yigC [C]

Identifier: 188527839

GI number: 188527839

Start: 1071423

End: 1073273

Strand: Direct

Name: yigC [C]

Synonym: HPSH_05425

Alternate gene names: 188527839

Gene position: 1071423-1073273 (Clockwise)

Preceding gene: 188527838

Following gene: 188527840

Centisome position: 66.61

GC content: 39.76

Gene sequence:

>1851_bases
ATGCGAGATTTTTTAAAGCTTTTAAAAGAGCATGATGAATTAGAAGTCATTGACACCCCCCTTGAAGTGGATTTAGAAAT
CGCTCATCTGGCCTATATAGAAGCGAAAAAGCCTAATGGGGGCAAAGCCCTTTTATTCACGCAACCCATAAGAAAAGAAC
ATGACCAAATCAAAACCTTTGATATGCCTGTTTTAATGAACGCTTTTGGCTCTTTCAAACGCTTGGAGCTTTTATTAAAA
ACCCCCATAGAAAGTCTGCAACAACGCATGCAAGCGTTCTTGCACTTTAACGCTCCTAAAAATTTCACTGAGGGTTTGAA
AGTCTTAAAAGATTTATGGGATTTAAGACACATTTTCCCTAAAAAAACCACTCGCCCTAAAGATCTCATTATCAAGCAAG
ATAAAGAAGTCAATTTGTTGGATCTACCCGTTTTAAAAACTTGGGAAAAAGATGGCGGGGCTTTTATCACTATGGGGCAA
GTCTATACCCAAAGCCTGGATCATAAAAAAAAGAATTTAGGCATGTATCGTTTGCAAGTTTATGATAAAAACCATTTAGG
CTTGCACTGGCAAATCCATAAAGACTCCCAACTCTTTTTCCACGAATACGCTAAGGCTAAAGTCAAAATGCCTGTCAGTA
TCGCTATTGGTGGGGATTTGCTCTACACATGGTGCGCGACAGCCCCCTTACCTTATGGGGTTTATGAACTCATGCTCTAT
GGGTTTATGAGAGGAAAAAAAGCGCAAGTAATGCCATGCTTGAGTAATTCTTTAAGCGTGCCAAGGGATTGCGATATTGT
GATAGAAGGGTTTGTGGATTGCGAAAAGTTAGAGCTTGAAGGGCCTTTTGGGGATCACACGGGCTATTATACCCCCATTG
AACCCTACCCTGTTTTAGAAGTCAAAACCATTAGCTATAAAAAAGATTCCATTTACTTAGCCACTGTGGTGGGTAAGCCC
CCTTTAGAAGACAAATACATGGGGTATTTGACTGAGCGCTTGTTCTTGCCCTTGCTTCAAATGAACGCCCCCAATCTGAT
AGATTATTGCATGCCAGAAAATGGGGTGTTTCATAATTTGATTTTAGCCAAAATACACACGCGCTATAACGCTCATGCCA
AACAAGTCATGCATGCTTTTTGGGGTGTGGGGCAGATGAGTTTTGTCAAACATGCGATTTTTGTCAATGAAGACGCTCCC
AATCTAAGAGACACCAACGCTATCATTGAGTATGTATTAGAAAATTTTTCTAAAGAAAAAATTCTCATCTCTCAAGGCAT
ATGCGACGCTTTAGATCATGCAAGCCCTGAATACGCTATGGGGGGGAAACTCGGTATTGATGCGACCTCTAAAAGCAATA
CCCCCCACCCCACGCTTTTAAACGATAACGCCTTATTGGCGCTTTTACAAGATAAAATGCCAAATATCGTTCTTTTGAAG
CAATATTACCCGCACACCCGTAACCCCATTTGCGTAATCAGCGTGGAAAAGAAAGACAAAAGCGTCATTGAATTGGCTAA
AAATTTGCTCGGTTTTGAAGAGTATTTACGCATTGTCATCTTTGTAGAGCATACCAGCAACGATTTAAACAACCCTTACA
TGCTGTTATGGCGCATCGTTAATAACATTGATGCACAGCGCGATATTCTCACCTCTAAACATTGTTTTTTTATAGACGCT
ACCAATAAGGGCGTTATGGATAAACATTTTAGAGAATGGCCTACAGAAACCAATTGCTCCATGGAAGTCATAGAAGATTT
GAAAAAGAAAGGGCTTTTAAAAGATTTTGAAACTTTAAATCAAAAATTCCATCTCACGCATTCTTTTAGCACGCATAAAG
AAGATCTATAA

Upstream 100 bases:

>100_bases
CATTATTGTAGATGAAGAAGTTTCTTTGGAAGTTTTAGAAGAGCTTAAAAACATTCCTGCGTGCTTAAGCGTTCATTATG
TGGTTATTTAAGGTAGTTGG

Downstream 100 bases:

>100_bases
AGAAGAATTATGACAGATTATAGCCAAAGGATTGATACCCTCATCGCAAAAATAGAAAAGGCTCGCACCGCCTATTCAAG
GCACCACATTGTAAAAATCG

Product: hypothetical protein

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MRDFLKLLKEHDELEVIDTPLEVDLEIAHLAYIEAKKPNGGKALLFTQPIRKEHDQIKTFDMPVLMNAFGSFKRLELLLK
TPIESLQQRMQAFLHFNAPKNFTEGLKVLKDLWDLRHIFPKKTTRPKDLIIKQDKEVNLLDLPVLKTWEKDGGAFITMGQ
VYTQSLDHKKKNLGMYRLQVYDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGVYELMLY
GFMRGKKAQVMPCLSNSLSVPRDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPVLEVKTISYKKDSIYLATVVGKP
PLEDKYMGYLTERLFLPLLQMNAPNLIDYCMPENGVFHNLILAKIHTRYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAP
NLRDTNAIIEYVLENFSKEKILISQGICDALDHASPEYAMGGKLGIDATSKSNTPHPTLLNDNALLALLQDKMPNIVLLK
QYYPHTRNPICVISVEKKDKSVIELAKNLLGFEEYLRIVIFVEHTSNDLNNPYMLLWRIVNNIDAQRDILTSKHCFFIDA
TNKGVMDKHFREWPTETNCSMEVIEDLKKKGLLKDFETLNQKFHLTHSFSTHKEDL

Sequences:

>Translated_616_residues
MRDFLKLLKEHDELEVIDTPLEVDLEIAHLAYIEAKKPNGGKALLFTQPIRKEHDQIKTFDMPVLMNAFGSFKRLELLLK
TPIESLQQRMQAFLHFNAPKNFTEGLKVLKDLWDLRHIFPKKTTRPKDLIIKQDKEVNLLDLPVLKTWEKDGGAFITMGQ
VYTQSLDHKKKNLGMYRLQVYDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGVYELMLY
GFMRGKKAQVMPCLSNSLSVPRDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPVLEVKTISYKKDSIYLATVVGKP
PLEDKYMGYLTERLFLPLLQMNAPNLIDYCMPENGVFHNLILAKIHTRYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAP
NLRDTNAIIEYVLENFSKEKILISQGICDALDHASPEYAMGGKLGIDATSKSNTPHPTLLNDNALLALLQDKMPNIVLLK
QYYPHTRNPICVISVEKKDKSVIELAKNLLGFEEYLRIVIFVEHTSNDLNNPYMLLWRIVNNIDAQRDILTSKHCFFIDA
TNKGVMDKHFREWPTETNCSMEVIEDLKKKGLLKDFETLNQKFHLTHSFSTHKEDL
>Mature_616_residues
MRDFLKLLKEHDELEVIDTPLEVDLEIAHLAYIEAKKPNGGKALLFTQPIRKEHDQIKTFDMPVLMNAFGSFKRLELLLK
TPIESLQQRMQAFLHFNAPKNFTEGLKVLKDLWDLRHIFPKKTTRPKDLIIKQDKEVNLLDLPVLKTWEKDGGAFITMGQ
VYTQSLDHKKKNLGMYRLQVYDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGVYELMLY
GFMRGKKAQVMPCLSNSLSVPRDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPVLEVKTISYKKDSIYLATVVGKP
PLEDKYMGYLTERLFLPLLQMNAPNLIDYCMPENGVFHNLILAKIHTRYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAP
NLRDTNAIIEYVLENFSKEKILISQGICDALDHASPEYAMGGKLGIDATSKSNTPHPTLLNDNALLALLQDKMPNIVLLK
QYYPHTRNPICVISVEKKDKSVIELAKNLLGFEEYLRIVIFVEHTSNDLNNPYMLLWRIVNNIDAQRDILTSKHCFFIDA
TNKGVMDKHFREWPTETNCSMEVIEDLKKKGLLKDFETLNQKFHLTHSFSTHKEDL

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=468, Percent_Identity=33.5470085470085, Blast_Score=262, Evalue=5e-71,
Organism=Saccharomyces cerevisiae, GI6320748, Length=324, Percent_Identity=25.6172839506173, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 70913; Mature: 70913

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFLKLLKEHDELEVIDTPLEVDLEIAHLAYIEAKKPNGGKALLFTQPIRKEHDQIKTF
CHHHHHHHHCCCCEEEECCCCCCCEEEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHC
DMPVLMNAFGSFKRLELLLKTPIESLQQRMQAFLHFNAPKNFTEGLKVLKDLWDLRHIFP
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCC
KKTTRPKDLIIKQDKEVNLLDLPVLKTWEKDGGAFITMGQVYTQSLDHKKKNLGMYRLQV
CCCCCCHHEEEECCCCCCEEECCCHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEE
YDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGVYELMLY
ECCCCCEEEEEEECCCHHHHHHHHHHEEECCEEEEECCHHHHHHHHCCCCCHHHHHHHHH
GFMRGKKAQVMPCLSNSLSVPRDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPVLE
HHHCCCCCEEEHHHHCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
VKTISYKKDSIYLATVVGKPPLEDKYMGYLTERLFLPLLQMNAPNLIDYCMPENGVFHNL
EEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHH
ILAKIHTRYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAPNLRDTNAIIEYVLENFSKEK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCE
ILISQGICDALDHASPEYAMGGKLGIDATSKSNTPHPTLLNDNALLALLQDKMPNIVLLK
EEECCCHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCEEEEHHHCCCCEEEEE
QYYPHTRNPICVISVEKKDKSVIELAKNLLGFEEYLRIVIFVEHTSNDLNNPYMLLWRIV
ECCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHEEEEEEEEECCCCCCCHHHHHHHHH
NNIDAQRDILTSKHCFFIDATNKGVMDKHFREWPTETNCSMEVIEDLKKKGLLKDFETLN
HCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHC
QKFHLTHSFSTHKEDL
CEEEEEECCCCCCCCC
>Mature Secondary Structure
MRDFLKLLKEHDELEVIDTPLEVDLEIAHLAYIEAKKPNGGKALLFTQPIRKEHDQIKTF
CHHHHHHHHCCCCEEEECCCCCCCEEEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHC
DMPVLMNAFGSFKRLELLLKTPIESLQQRMQAFLHFNAPKNFTEGLKVLKDLWDLRHIFP
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCC
KKTTRPKDLIIKQDKEVNLLDLPVLKTWEKDGGAFITMGQVYTQSLDHKKKNLGMYRLQV
CCCCCCHHEEEECCCCCCEEECCCHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCEEEEEE
YDKNHLGLHWQIHKDSQLFFHEYAKAKVKMPVSIAIGGDLLYTWCATAPLPYGVYELMLY
ECCCCCEEEEEEECCCHHHHHHHHHHEEECCEEEEECCHHHHHHHHCCCCCHHHHHHHHH
GFMRGKKAQVMPCLSNSLSVPRDCDIVIEGFVDCEKLELEGPFGDHTGYYTPIEPYPVLE
HHHCCCCCEEEHHHHCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
VKTISYKKDSIYLATVVGKPPLEDKYMGYLTERLFLPLLQMNAPNLIDYCMPENGVFHNL
EEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHH
ILAKIHTRYNAHAKQVMHAFWGVGQMSFVKHAIFVNEDAPNLRDTNAIIEYVLENFSKEK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCE
ILISQGICDALDHASPEYAMGGKLGIDATSKSNTPHPTLLNDNALLALLQDKMPNIVLLK
EEECCCHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCEEEEHHHCCCCEEEEE
QYYPHTRNPICVISVEKKDKSVIELAKNLLGFEEYLRIVIFVEHTSNDLNNPYMLLWRIV
ECCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHEEEEEEEEECCCCCCCHHHHHHHHH
NNIDAQRDILTSKHCFFIDATNKGVMDKHFREWPTETNCSMEVIEDLKKKGLLKDFETLN
HCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHC
QKFHLTHSFSTHKEDL
CEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]