| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is pta [H]
Identifier: 188527730
GI number: 188527730
Start: 936737
End: 938293
Strand: Reverse
Name: pta [H]
Synonym: HPSH_04765
Alternate gene names: 188527730
Gene position: 938293-936737 (Counterclockwise)
Preceding gene: 188527740
Following gene: 188527729
Centisome position: 58.33
GC content: 43.16
Gene sequence:
>1557_bases ATGCAAGGTTTGTGGATTTACCCAGAGAATACAGAAGTTTTAGGAATCGCTTGCAAGAGCCTTTTAAAAGCGCTAAAGCC GCGCTATCAAAAAATCGCATTGTTTTCGCCCATTGATGGGGGGTGTGAGGGCTTTTTGGGGTGTGATGGCTTGAGTCCTT TAGAGTTTCATAGCGCCATAGACAAACAAAAGGCTTTAGAGCTTGCGAGCGCTGCTCAAGAAGAGTTACTTTTTGAAACG ATTCTCAAACGCTATGATGAATTACAAACCACGCATGACTTTGTCATTGGTTTAGGGTATGCGCCGAAGTTTTTCTTAAA CGCTCTTTTAGATTTAAACACCACTTTAGCCAAGCATTTAAACGCTCCTATTGTGGCTGTCGCGCAAACGAGTTTAGAGC GTTTGAAAGCCATGCATTCTCACGCTATCAAAAAAGAAGCCCCTTTCGCTGTAGGGTTGTTTGCGGGCGAAATGCTTGAA AAACCCAATTTTTTGAGCGCGTCTCTTTGCAAGCAACGATGCGAATTAGAAGCGGATCTGATAGAAAGCGTGTTGCAAAC AAAAAGCGAGATCACCACCCCTTTAGCCTTTCAAATGGGTTTGGAAAAAAAGGCTAAAAAACAGATTAAAAAAGTGGTTT TACCAGAGAGCGAAGATGAAAGGATTTTAAAAGCCGCGCATCGTTTGAACGCTATGGGCGCGGTAGGATTGATTTTATTA GGCGATAAAGAAGCCATTAATTCCCAAGCGAAAAATTTGAACTTGAATTTAGAAAATGCAGAAATCATTGATCCCAACAC TTCTCATTATAAAGAAGAGTTCGCTAACAATTTGTATAAATTGCGAAAATCAAAGGGCTTGAGTGAGCAAGAAGCTAAGC AATTGGTGCTCAATAAGACTTATTTTGCGACCATGCTCGTGCATTTGGGCTATGCGCATGCGATGGTTTCTGGGGTGAAT CACACCACGGCCGACACCATTAGACCCGCTTTACAAATCATTAAAACCAAGCCCGGCGTGAGCCTGGTTTCAAGCGTGTT TTTAATGTGTTTAGACACTCAAGTGTTAGTCTTTGGGGATTGTGCGATTATCCCTAACCCTAGCCCTAAAGAATTGGCTG AAATCGCTATCACTTCCGCACAAAGCGCCAAGCAATTCAATATCGCGCCTAAAGTGGCCTTACTCTCTTATGCGACAGGC GATTCCGCTCAAGGCGAAATGATAGACAAAATCAACGAAGCTGTAACCATCGCTCAACATTTAGATCCACAATTAGAAAT TGATGGCCCCTTACAATTTGACGCTTCCATTGATAAAAGCGTAGCGAAGAAAAAAATGCCTAACAGCCAAGTGGCCGGGC AAGCTAGCGTTTTTATTTTCCCGGATTTAAACGCTGGGAATATCGCTTATAAAGCGGTGCAACGAAGCGCTAAAGCCGTG GCGATAGGGCCCATCTTGCAAGGTTTGAATAAGCCCATTAACGATTTGAGTAGGGGCGCTTTGGTGGAAGATATTATCAA CACCGTTTTGATTAGCGCCCTTCAAGCGCAAGATTAA
Upstream 100 bases:
>100_bases GTAAAAAATGCTAAAAGCATTTTACAAAATCATGGTTTCGTTTAGGTTTAATTAAATTTTGCTACAATTAAATAAAAAAC GATAATTTACGGAGTTTTGC
Downstream 100 bases:
>100_bases TCCACTAGGAGAAATTGATGGAAATTTTAGTTTTGAATCTGGGCAGTTCGTCTATTAAGTTTAAATTGTTTGACATGAAA GAAAACAAGCCCTTAGCGAG
Product: phosphotransacetylase
Products: NA
Alternate protein names: Phosphotransacetylase [H]
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MQGLWIYPENTEVLGIACKSLLKALKPRYQKIALFSPIDGGCEGFLGCDGLSPLEFHSAIDKQKALELASAAQEELLFET ILKRYDELQTTHDFVIGLGYAPKFFLNALLDLNTTLAKHLNAPIVAVAQTSLERLKAMHSHAIKKEAPFAVGLFAGEMLE KPNFLSASLCKQRCELEADLIESVLQTKSEITTPLAFQMGLEKKAKKQIKKVVLPESEDERILKAAHRLNAMGAVGLILL GDKEAINSQAKNLNLNLENAEIIDPNTSHYKEEFANNLYKLRKSKGLSEQEAKQLVLNKTYFATMLVHLGYAHAMVSGVN HTTADTIRPALQIIKTKPGVSLVSSVFLMCLDTQVLVFGDCAIIPNPSPKELAEIAITSAQSAKQFNIAPKVALLSYATG DSAQGEMIDKINEAVTIAQHLDPQLEIDGPLQFDASIDKSVAKKKMPNSQVAGQASVFIFPDLNAGNIAYKAVQRSAKAV AIGPILQGLNKPINDLSRGALVEDIINTVLISALQAQD
Sequences:
>Translated_518_residues MQGLWIYPENTEVLGIACKSLLKALKPRYQKIALFSPIDGGCEGFLGCDGLSPLEFHSAIDKQKALELASAAQEELLFET ILKRYDELQTTHDFVIGLGYAPKFFLNALLDLNTTLAKHLNAPIVAVAQTSLERLKAMHSHAIKKEAPFAVGLFAGEMLE KPNFLSASLCKQRCELEADLIESVLQTKSEITTPLAFQMGLEKKAKKQIKKVVLPESEDERILKAAHRLNAMGAVGLILL GDKEAINSQAKNLNLNLENAEIIDPNTSHYKEEFANNLYKLRKSKGLSEQEAKQLVLNKTYFATMLVHLGYAHAMVSGVN HTTADTIRPALQIIKTKPGVSLVSSVFLMCLDTQVLVFGDCAIIPNPSPKELAEIAITSAQSAKQFNIAPKVALLSYATG DSAQGEMIDKINEAVTIAQHLDPQLEIDGPLQFDASIDKSVAKKKMPNSQVAGQASVFIFPDLNAGNIAYKAVQRSAKAV AIGPILQGLNKPINDLSRGALVEDIINTVLISALQAQD >Mature_518_residues MQGLWIYPENTEVLGIACKSLLKALKPRYQKIALFSPIDGGCEGFLGCDGLSPLEFHSAIDKQKALELASAAQEELLFET ILKRYDELQTTHDFVIGLGYAPKFFLNALLDLNTTLAKHLNAPIVAVAQTSLERLKAMHSHAIKKEAPFAVGLFAGEMLE KPNFLSASLCKQRCELEADLIESVLQTKSEITTPLAFQMGLEKKAKKQIKKVVLPESEDERILKAAHRLNAMGAVGLILL GDKEAINSQAKNLNLNLENAEIIDPNTSHYKEEFANNLYKLRKSKGLSEQEAKQLVLNKTYFATMLVHLGYAHAMVSGVN HTTADTIRPALQIIKTKPGVSLVSSVFLMCLDTQVLVFGDCAIIPNPSPKELAEIAITSAQSAKQFNIAPKVALLSYATG DSAQGEMIDKINEAVTIAQHLDPQLEIDGPLQFDASIDKSVAKKKMPNSQVAGQASVFIFPDLNAGNIAYKAVQRSAKAV AIGPILQGLNKPINDLSRGALVEDIINTVLISALQAQD
Specific function: Conversion of acetate to acetyl-CoA; second step. [C]
COG id: COG0280
COG function: function code C; Phosphotransacetylase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788635, Length=344, Percent_Identity=49.1279069767442, Blast_Score=325, Evalue=4e-90, Organism=Escherichia coli, GI1788800, Length=311, Percent_Identity=35.048231511254, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI1788806, Length=326, Percent_Identity=27.6073619631902, Blast_Score=157, Evalue=2e-39,
Paralogues:
None
Copy number: 1420 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1250 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004614 - InterPro: IPR002505 [H]
Pfam domain/function: PF01515 PTA_PTB [H]
EC number: =2.3.1.8 [H]
Molecular weight: Translated: 56334; Mature: 56334
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGLWIYPENTEVLGIACKSLLKALKPRYQKIALFSPIDGGCEGFLGCDGLSPLEFHSAI CCCEEECCCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHH DKQKALELASAAQEELLFETILKRYDELQTTHDFVIGLGYAPKFFLNALLDLNTTLAKHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHC NAPIVAVAQTSLERLKAMHSHAIKKEAPFAVGLFAGEMLEKPNFLSASLCKQRCELEADL CCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCHHHHHHHHHCCCHHH IESVLQTKSEITTPLAFQMGLEKKAKKQIKKVVLPESEDERILKAAHRLNAMGAVGLILL HHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEE GDKEAINSQAKNLNLNLENAEIIDPNTSHYKEEFANNLYKLRKSKGLSEQEAKQLVLNKT CCHHHHHHHHHCCEEECCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YFATMLVHLGYAHAMVSGVNHTTADTIRPALQIIKTKPGVSLVSSVFLMCLDTQVLVFGD HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEC CAIIPNPSPKELAEIAITSAQSAKQFNIAPKVALLSYATGDSAQGEMIDKINEAVTIAQH EEECCCCCHHHHHHHHHHHHHCCHHCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHH LDPQLEIDGPLQFDASIDKSVAKKKMPNSQVAGQASVFIFPDLNAGNIAYKAVQRSAKAV CCCCEEECCCEEECCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCE AIGPILQGLNKPINDLSRGALVEDIINTVLISALQAQD EHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQGLWIYPENTEVLGIACKSLLKALKPRYQKIALFSPIDGGCEGFLGCDGLSPLEFHSAI CCCEEECCCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHH DKQKALELASAAQEELLFETILKRYDELQTTHDFVIGLGYAPKFFLNALLDLNTTLAKHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHC NAPIVAVAQTSLERLKAMHSHAIKKEAPFAVGLFAGEMLEKPNFLSASLCKQRCELEADL CCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCHHHHHHHHHCCCHHH IESVLQTKSEITTPLAFQMGLEKKAKKQIKKVVLPESEDERILKAAHRLNAMGAVGLILL HHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEE GDKEAINSQAKNLNLNLENAEIIDPNTSHYKEEFANNLYKLRKSKGLSEQEAKQLVLNKT CCHHHHHHHHHCCEEECCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YFATMLVHLGYAHAMVSGVNHTTADTIRPALQIIKTKPGVSLVSSVFLMCLDTQVLVFGD HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEC CAIIPNPSPKELAEIAITSAQSAKQFNIAPKVALLSYATGDSAQGEMIDKINEAVTIAQH EEECCCCCHHHHHHHHHHHHHCCHHCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHH LDPQLEIDGPLQFDASIDKSVAKKKMPNSQVAGQASVFIFPDLNAGNIAYKAVQRSAKAV CCCCEEECCCEEECCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCE AIGPILQGLNKPINDLSRGALVEDIINTVLISALQAQD EHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]