| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527740
Identifier: 188527740
GI number: 188527740
Start: 950601
End: 950672
Strand: Reverse
Name: 188527740
Synonym: HPSH_04815
Alternate gene names: NA
Gene position: 950672-950601 (Counterclockwise)
Preceding gene: 188527741
Following gene: 188527730
Centisome position: 59.1
GC content: 40.28
Gene sequence:
>72_bases TTGGGGGTTTTAAAAGCGGTTTTTTTTTGGGTTAGGGGAACGCCTTTAGCGTTTGATCGCTTCACAAAATAA
Upstream 100 bases:
>100_bases GTAACTTTGCGCGCTTCCTGCACTAAATACAAATGTATGAGAGTGTTATAACAAATTAGCGGCATTCATTCCAATCGCTA AAGATGTTTAGGATTTCTGC
Downstream 100 bases:
>100_bases AAGAGCTTTGAAGCGCTTAAAGCAAAATAACAGCTTTAATAAAGCGTTCTTTAGGGGGTTAATTTGAGATAAGGATTTTG GGGTTGTTTTAAAGCGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 23; Mature: 22
Protein sequence:
>23_residues MGVLKAVFFWVRGTPLAFDRFTK
Sequences:
>Translated_23_residues MGVLKAVFFWVRGTPLAFDRFTK >Mature_22_residues GVLKAVFFWVRGTPLAFDRFTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 2687; Mature: 2556
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVLKAVFFWVRGTPLAFDRFTK CCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GVLKAVFFWVRGTPLAFDRFTK CHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA