| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
Click here to switch to the map view.
The map label for this gene is ackA [H]
Identifier: 188527729
GI number: 188527729
Start: 935514
End: 936719
Strand: Reverse
Name: ackA [H]
Synonym: HPSH_04760
Alternate gene names: 188527729
Gene position: 936719-935514 (Counterclockwise)
Preceding gene: 188527730
Following gene: 188527728
Centisome position: 58.23
GC content: 41.87
Gene sequence:
>1206_bases ATGGAAATTTTAGTTTTGAATCTGGGCAGTTCGTCTATTAAGTTTAAATTGTTTGACATGAAAGAAAACAAGCCCTTAGC GAGCGGTTTGGCCGAAAAAATCGGCGAAGAAATAGGGCAGTTGAAAATCAAATCGCATTTGCACCATAACGAGCAAGAGC TTAAAGAAAAGCTTGTGATTAAAGATCATGCGAGCGGGCTTTTAATGATTCGTGAGAATTTGACGAAAATGGGGATCATC AAAGATTTCAATCAAATTGACGCTATAGGGCATCGTGTGGTTCAAGGAGGGGATAAATTCCATGCCCCAATCTTAGTTAA TGAAAAAGTCATGCAAGAAATTGGCAAGCTTTCTATTTTAGCCCCCTTGCACAACCCGGCGAATTTAGCCGGTATTGAGT TTGTTCAAAAAGCGCACCCCCATATCCCTCAAATCGCTGTTTTTGACACCGCATTCCATGCCACTATGCCCAGTTACGCT TACATGTATGCGTTGCCTTATGAATTGTATGAAAAGTATCAAATCCGCCGTTATGGTTTCCATGGGACTTCACACCATTA TGTGGCTAAAGAAGCGGCGAAGTTTTTGAATACCGCTTATGAGGAATTTAACGCTATCAGTTTGCATTTAGGGAACGGCT CAAGCGCAGCAGCCATTCAAAAGGGTAAAAGCGTGGATACTTCTATGGGGCTAACCCCTTTAGAAGGCTTGATCATGGGC ACAAGGTGTGGGGATATTGATCCCACTGTGGTGGAATACATTGCGCAATGCGCTGATAAAAGTTTAGAAGAAGTGATGAA AATTTTAAATTATGAAAGCGGCTTGAAAGGCATTTGTGGGGATAATGACGCCAGAAACATAGAAGCCAGAAAAGAAAAAG GCGATAAGCAGGCCAAGCTCGCTTTTGAAATGTGCGCTTATCGCATTAAAAAGTATATTGGGGCTTACATGGCAGTCTTA AAAAAAGTGGATGCGATTATCTTTACAGCGGGATTAGGGGAAAACTACTCGGCTTTAAGAGAGAGCGTGTGCGAAGGCTT AGAAGATTTAGGGATCGCTTTGCACAAGCCCACGAACGACAATCCGGGCAACGGATTAGTGGATTTGAGCCAGCCTGACG CTAAAGTTAAGGTTTTATTAATCCCTACTGATGAAGAGCTAGAAATCGCTTTACAAGCGAAAGAAATAGCAGAAAAATTA AAATAA
Upstream 100 bases:
>100_bases CCATTAACGATTTGAGTAGGGGCGCTTTGGTGGAAGATATTATCAACACCGTTTTGATTAGCGCCCTTCAAGCGCAAGAT TAATCCACTAGGAGAAATTG
Downstream 100 bases:
>100_bases AGGTTGTTTGATGAAAATGGTTCATTTTTTAGAGGGCGTTCATTTTGAAAAGCTCCACATTGAAGCGTTGAGTGAAAATT CTTCCAATAAGGAAATGCGC
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MEILVLNLGSSSIKFKLFDMKENKPLASGLAEKIGEEIGQLKIKSHLHHNEQELKEKLVIKDHASGLLMIRENLTKMGII KDFNQIDAIGHRVVQGGDKFHAPILVNEKVMQEIGKLSILAPLHNPANLAGIEFVQKAHPHIPQIAVFDTAFHATMPSYA YMYALPYELYEKYQIRRYGFHGTSHHYVAKEAAKFLNTAYEEFNAISLHLGNGSSAAAIQKGKSVDTSMGLTPLEGLIMG TRCGDIDPTVVEYIAQCADKSLEEVMKILNYESGLKGICGDNDARNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMAVL KKVDAIIFTAGLGENYSALRESVCEGLEDLGIALHKPTNDNPGNGLVDLSQPDAKVKVLLIPTDEELEIALQAKEIAEKL K
Sequences:
>Translated_401_residues MEILVLNLGSSSIKFKLFDMKENKPLASGLAEKIGEEIGQLKIKSHLHHNEQELKEKLVIKDHASGLLMIRENLTKMGII KDFNQIDAIGHRVVQGGDKFHAPILVNEKVMQEIGKLSILAPLHNPANLAGIEFVQKAHPHIPQIAVFDTAFHATMPSYA YMYALPYELYEKYQIRRYGFHGTSHHYVAKEAAKFLNTAYEEFNAISLHLGNGSSAAAIQKGKSVDTSMGLTPLEGLIMG TRCGDIDPTVVEYIAQCADKSLEEVMKILNYESGLKGICGDNDARNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMAVL KKVDAIIFTAGLGENYSALRESVCEGLEDLGIALHKPTNDNPGNGLVDLSQPDAKVKVLLIPTDEELEIALQAKEIAEKL K >Mature_401_residues MEILVLNLGSSSIKFKLFDMKENKPLASGLAEKIGEEIGQLKIKSHLHHNEQELKEKLVIKDHASGLLMIRENLTKMGII KDFNQIDAIGHRVVQGGDKFHAPILVNEKVMQEIGKLSILAPLHNPANLAGIEFVQKAHPHIPQIAVFDTAFHATMPSYA YMYALPYELYEKYQIRRYGFHGTSHHYVAKEAAKFLNTAYEEFNAISLHLGNGSSAAAIQKGKSVDTSMGLTPLEGLIMG TRCGDIDPTVVEYIAQCADKSLEEVMKILNYESGLKGICGDNDARNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMAVL KKVDAIIFTAGLGENYSALRESVCEGLEDLGIALHKPTNDNPGNGLVDLSQPDAKVKVLLIPTDEELEIALQAKEIAEKL K
Specific function: Anaerobic degradation of L-threonine to propionate. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family [H]
Homologues:
Organism=Escherichia coli, GI145693184, Length=397, Percent_Identity=40.8060453400504, Blast_Score=296, Evalue=1e-81, Organism=Escherichia coli, GI1788633, Length=402, Percent_Identity=43.2835820895522, Blast_Score=292, Evalue=3e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000890 - InterPro: IPR004372 [H]
Pfam domain/function: PF00871 Acetate_kinase [H]
EC number: =2.7.2.1 [H]
Molecular weight: Translated: 44317; Mature: 44317
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS01075 ACETATE_KINASE_1 ; PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEILVLNLGSSSIKFKLFDMKENKPLASGLAEKIGEEIGQLKIKSHLHHNEQELKEKLVI CEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KDHASGLLMIRENLTKMGIIKDFNQIDAIGHRVVQGGDKFHAPILVNEKVMQEIGKLSIL HCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHCCEEEE APLHNPANLAGIEFVQKAHPHIPQIAVFDTAFHATMPSYAYMYALPYELYEKYQIRRYGF ECCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCC HGTSHHYVAKEAAKFLNTAYEEFNAISLHLGNGSSAAAIQKGKSVDTSMGLTPLEGLIMG CCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCHHHEEEE TRCGDIDPTVVEYIAQCADKSLEEVMKILNYESGLKGICGDNDARNIEARKEKGDKQAKL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHH AFEMCAYRIKKYIGAYMAVLKKVDAIIFTAGLGENYSALRESVCEGLEDLGIALHKPTND HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCHHHCCEEEECCCCC NPGNGLVDLSQPDAKVKVLLIPTDEELEIALQAKEIAEKLK CCCCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MEILVLNLGSSSIKFKLFDMKENKPLASGLAEKIGEEIGQLKIKSHLHHNEQELKEKLVI CEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KDHASGLLMIRENLTKMGIIKDFNQIDAIGHRVVQGGDKFHAPILVNEKVMQEIGKLSIL HCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHCCEEEE APLHNPANLAGIEFVQKAHPHIPQIAVFDTAFHATMPSYAYMYALPYELYEKYQIRRYGF ECCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCC HGTSHHYVAKEAAKFLNTAYEEFNAISLHLGNGSSAAAIQKGKSVDTSMGLTPLEGLIMG CCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCHHHEEEE TRCGDIDPTVVEYIAQCADKSLEEVMKILNYESGLKGICGDNDARNIEARKEKGDKQAKL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHH AFEMCAYRIKKYIGAYMAVLKKVDAIIFTAGLGENYSALRESVCEGLEDLGIALHKPTND HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCHHHCCEEEECCCCC NPGNGLVDLSQPDAKVKVLLIPTDEELEIALQAKEIAEKLK CCCCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]