| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527326
Identifier: 188527326
GI number: 188527326
Start: 517147
End: 517242
Strand: Reverse
Name: 188527326
Synonym: HPSH_02665
Alternate gene names: NA
Gene position: 517242-517147 (Counterclockwise)
Preceding gene: 188527328
Following gene: 188527319
Centisome position: 32.16
GC content: 29.17
Gene sequence:
>96_bases ATGGTTTCAAAATCGCCCCCCTATCCTTTGAAAAGCTTTACCATAAAAAAAGTTTTAAAAAACAATATTAAAGCCAAACA AGAATGTTTTGCTTAA
Upstream 100 bases:
>100_bases TTAAAAAATTATAAAAGCTATTAAAATTGGGTATTGATAATAAAATAGAACTTACACAAGCAAGCGGTAATTTTAAAAAA CACAAAGGATGAGAGAGAGC
Downstream 100 bases:
>100_bases TGCCCTTCATCGGTTAAAACAGCCCCTGCCAAATACACATAAGTGAGAATCATAAAAACAAAAGCTTGTAAAATCCCCAT AAAAAACAAGACCATAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 31; Mature: 31
Protein sequence:
>31_residues MVSKSPPYPLKSFTIKKVLKNNIKAKQECFA
Sequences:
>Translated_31_residues MVSKSPPYPLKSFTIKKVLKNNIKAKQECFA >Mature_31_residues MVSKSPPYPLKSFTIKKVLKNNIKAKQECFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3539; Mature: 3539
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSKSPPYPLKSFTIKKVLKNNIKAKQECFA CCCCCCCCCCHHHHHHHHHHHCCHHHHHHCC >Mature Secondary Structure MVSKSPPYPLKSFTIKKVLKNNIKAKQECFA CCCCCCCCCCHHHHHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA