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The map label for this gene is 188527328

Identifier: 188527328

GI number: 188527328

Start: 517921

End: 518742

Strand: Reverse

Name: 188527328

Synonym: HPSH_02675

Alternate gene names: NA

Gene position: 518742-517921 (Counterclockwise)

Preceding gene: 188527329

Following gene: 188527326

Centisome position: 32.25

GC content: 38.44

Gene sequence:

>822_bases
TTGCGTGTTTTTATCATTTCTTTAAATCAGAAAGTGTGCGATCAATTTGGTTTAGTTTTTAGAGACACCACAACTTTACT
CCATAATATCAATGCCACCCACCACAAGGCGCAAATTTTTGATGCGATTTATTCTAAAACTTTTGAAGGCGAGTTGCACC
CCTTAGTTAAAAAGCATTTACACCCTTATTTCATCACGCAAAACATCAAAGACATGGGGATTACAACCAACCTAATCAGT
AGGGTTTCTAAGTTTTATTACGCTTTAAAATACTATGCGAAGTTTATGAGCTTGGGGGAGCTTGGGTGCTATGCGAGCCA
TTATTCCTTGTGGCAAAAATGCATAGAGTTAAATGAGCCCATTTGTATTTTAGAAGACGATATAACCTTGAAAGAGGATT
TTAAAGAGGGCTTGGATTTTTTAGAAAAACACATCCAAGAACTAGGCTATGTGCGTTTGATGCATTTGTTGTATGATGCC
AGTGTAAGAAGCGAGCCATTGAGCCACAAAAACCACGAGATACAAGAGCGTGTGGGGATTATTAAAGCTTATAGTCATGG
GGTGGGGACGCAAGGCTATGTGATCACGCCCAAGATTGCCAAAGTTTTTAAAAAATGCAGCCAAAAATGGGTTGTTCCTG
TGGATACGATAATGGACGCTACTTTTATCCATGGCGTGAAAAATTTGGTGTTACAACCTTTTGTGATCGCTGATGATGAG
CAAATCTCTACGATAGCGCGAAAAGAAGAACCCTATAGCCCTAAAATCGCCTTAATGAGAAAACTCCATTTTAAATATTT
GAAATATTGGCAGTTTGTATAG

Upstream 100 bases:

>100_bases
AGCTTTTTTGTAGCCGTGATGCGATTTTATTCGCAAAGTTTTATTGTAAAACAGAGCCTAAAAACGATATACTCTATTAA
AAATTATGGGAGTTTAAGCT

Downstream 100 bases:

>100_bases
CCAATAATAAACATACTAAAGAGCGTTTTAAAGCGTTAGTTGCCCCTATTTGATTTAGAACAAAACTGGTTTTTAATCGC
CTTTAAAAATGGATTAAAAT

Product: lipooligosaccharide 5G8 epitope biosynthesis-associated protein (lex2B)

Products: NA

Alternate protein names: Beta-1 4-Galactosyltransferase; Lipopolysaccharide Biosynthesis Protein; Pbeta-1 4-Galactosyltransferase; 50S Ribosomal Protein L; Glycosyl Transferase Family; Lipooligosaccharide 5G8 Epitope Biosynthesis-Protein; Lipooligosaccharide Biosynthesis Glycosyltransferase; Lob1 Protein; Lex2B Protein; LPS Glycosyltransferase Subfamily Protein; Glycosyltransferase WavM; Glycosyltransferase; Glycosyl Transferase

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRVFIISLNQKVCDQFGLVFRDTTTLLHNINATHHKAQIFDAIYSKTFEGELHPLVKKHLHPYFITQNIKDMGITTNLIS
RVSKFYYALKYYAKFMSLGELGCYASHYSLWQKCIELNEPICILEDDITLKEDFKEGLDFLEKHIQELGYVRLMHLLYDA
SVRSEPLSHKNHEIQERVGIIKAYSHGVGTQGYVITPKIAKVFKKCSQKWVVPVDTIMDATFIHGVKNLVLQPFVIADDE
QISTIARKEEPYSPKIALMRKLHFKYLKYWQFV

Sequences:

>Translated_273_residues
MRVFIISLNQKVCDQFGLVFRDTTTLLHNINATHHKAQIFDAIYSKTFEGELHPLVKKHLHPYFITQNIKDMGITTNLIS
RVSKFYYALKYYAKFMSLGELGCYASHYSLWQKCIELNEPICILEDDITLKEDFKEGLDFLEKHIQELGYVRLMHLLYDA
SVRSEPLSHKNHEIQERVGIIKAYSHGVGTQGYVITPKIAKVFKKCSQKWVVPVDTIMDATFIHGVKNLVLQPFVIADDE
QISTIARKEEPYSPKIALMRKLHFKYLKYWQFV
>Mature_273_residues
MRVFIISLNQKVCDQFGLVFRDTTTLLHNINATHHKAQIFDAIYSKTFEGELHPLVKKHLHPYFITQNIKDMGITTNLIS
RVSKFYYALKYYAKFMSLGELGCYASHYSLWQKCIELNEPICILEDDITLKEDFKEGLDFLEKHIQELGYVRLMHLLYDA
SVRSEPLSHKNHEIQERVGIIKAYSHGVGTQGYVITPKIAKVFKKCSQKWVVPVDTIMDATFIHGVKNLVLQPFVIADDE
QISTIARKEEPYSPKIALMRKLHFKYLKYWQFV

Specific function: Unknown

COG id: COG3306

COG function: function code M; Glycosyltransferase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31836; Mature: 31836

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFIISLNQKVCDQFGLVFRDTTTLLHNINATHHKAQIFDAIYSKTFEGELHPLVKKHL
CEEEEEECCHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC
HPYFITQNIKDMGITTNLISRVSKFYYALKYYAKFMSLGELGCYASHYSLWQKCIELNEP
CCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ICILEDDITLKEDFKEGLDFLEKHIQELGYVRLMHLLYDASVRSEPLSHKNHEIQERVGI
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
IKAYSHGVGTQGYVITPKIAKVFKKCSQKWVVPVDTIMDATFIHGVKNLVLQPFVIADDE
HHHHHCCCCCCCEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCH
QISTIARKEEPYSPKIALMRKLHFKYLKYWQFV
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVFIISLNQKVCDQFGLVFRDTTTLLHNINATHHKAQIFDAIYSKTFEGELHPLVKKHL
CEEEEEECCHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC
HPYFITQNIKDMGITTNLISRVSKFYYALKYYAKFMSLGELGCYASHYSLWQKCIELNEP
CCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ICILEDDITLKEDFKEGLDFLEKHIQELGYVRLMHLLYDASVRSEPLSHKNHEIQERVGI
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
IKAYSHGVGTQGYVITPKIAKVFKKCSQKWVVPVDTIMDATFIHGVKNLVLQPFVIADDE
HHHHHCCCCCCCEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCH
QISTIARKEEPYSPKIALMRKLHFKYLKYWQFV
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA