| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is lldP [H]
Identifier: 188526944
GI number: 188526944
Start: 135348
End: 136997
Strand: Direct
Name: lldP [H]
Synonym: HPSH_00705
Alternate gene names: 188526944
Gene position: 135348-136997 (Clockwise)
Preceding gene: 188526939
Following gene: 188526945
Centisome position: 8.41
GC content: 43.52
Gene sequence:
>1650_bases ATGGAATTTTATCAAGTCTATGACCCATTAGGCCATATTTGGCTGAGCGCTTTAGTGGCGCTATCGCCTATTGCGCTCTT TTTTATTTCTCTTATTGTCTTTAAACTTAAAGGGTATAGCGCTGGGTTTTTAAGCTTAGTGCTTTCAATCATTATTGCGT TATTTGTGTATAAAATGCCTGCTCAAATGGTGAGCGCGAGTTTTTTCTATGGCTTTCTTTATGGCTTGTGGCCGATCGCT TGGATTGTGATCGCTGCGATTTTTCTTTACAACCTTTCAGTGAAATCCGGGTATTTTGAGATTTTAAAAGAAAGCATTTT AACCCTAACGCCGGATCACCGGATTTTGGTGATTTTGATTGGCTTTTGTTTTGGCTCGTTTTTAGAAGGAGCGATCGGCT TTGGAGGCCCGGTAGCGATCACAGCGGCGATTTTAGTCGGCCTTGGGCTAAACCCCTTATACGCTGCCGGATTATGCCTA ATCGCTAACACCGCTCCTGTAGCTTTTGGCGCGGTGGGTATTCCTATTACGGCAATGGCTAGCGTGGTGGGTATCCCTGA ATTAGAGATTTCTCAAATGGTGGGCAGGGTGTTACCCATTTTTTCCATTGGTATTCCTTTTTTCATCGTGTTTTTAATGG ATGGTTTTAAAGGGATTAGAGAGACTTTTCCTGCAGTGGCCGTTACCGGGTTTAGTTTCGCTATCGCGCAATTTTTAAGC TCTAATTATCTAGGGCCGCAACTCCCGGATATTATTTCAGCCTTAGTGTCATTGATCGCTACCACTTTGTTTTTAAAATT CTGGCAGCCCAAACGCATTTTCACCAGCAATGGCAAAGAGCCCGCAATCAGCACAGAAAAACACCATATTTGTAAAGTGA TTGTGGCGTGGATGCCTTTTGTGTTGCTCACTATTACGATTATCATATGGACGCAACCCTGGTTTAAAGCGCTCTTTAAA GAAGGCGGGGCTTTGGCGTTTTCTAGCTTTGCGTTTGAATTCAATTCTATCAGTCAAAAGGTTTTTAAAACCGTTCCCAT TGTTACTGAAGCGACCAATTTTCCTGTCGTGTTCAAATTCCCTCTAATTCTAACGACAGGCACTTCCATTTTTTTAGCCG CTCTTTTAAGCGTGTTTTTGTTGCGCGTGAAAATCAGCGATGCGATAGGGGTGTTTGGGGCTACTTTAAAAGAAATGCGT TTGCCGATTTTAACCATTGGCGTGGTTTTAGCGTTTGCGTATGTGGCTAATTATAGCGGCATGAGCGCCACGCTCGCTTT AGCGTTAGCGGATACTGGGCATGTTTTCACTTTCTTTTCGCCTGTTGTAGGCTGGCTTGGGGTGTTTTTAACCGGAAGTG ATACGAGTTCTAATCTTTTATTTGGCTCTTTGCAAATGCTCATCGCTACACAGCTTGGCTTGCCTGAAGTGCTTTTCTTA GCGGCAAACACTTCAGGGGGTGTTGTGGGTAAAATGATAAGCCCTCAAAGTATCGCTATCGCTTGCGCGGCGGTGGGGTT AGTGGGGAAAGAGAGCGAATTGTTCAGATTTACAGTAAAATATTCTATCGCTTTGGCGATCATTATGGGGATTGTCTTCA CTCTTATTGCTTATGTCTTCCCCTTTATTATCCCGGTTACTCCTACTTAA
Upstream 100 bases:
>100_bases ACAAACCCATTAAATTTGACTTAATATTAAATGCTACTTAAAATTAGTTTTTTCTTTTAAGTAAGATAAAAAAATACTTT TAATTATTCAAGGAAAATTT
Downstream 100 bases:
>100_bases TGGAGGGGGTTTAGGGGAGTAAGAGAATATTTTTTAAAGGGATTTTTAGTGTCAGAATTTCATCAAGTTTATGACCCTTT GGGTAATATTTGGCTGAGCG
Product: L-lactate permease
Products: Proton [Cytoplasm]; lactate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MEFYQVYDPLGHIWLSALVALSPIALFFISLIVFKLKGYSAGFLSLVLSIIIALFVYKMPAQMVSASFFYGFLYGLWPIA WIVIAAIFLYNLSVKSGYFEILKESILTLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCL IANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFKGIRETFPAVAVTGFSFAIAQFLS SNYLGPQLPDIISALVSLIATTLFLKFWQPKRIFTSNGKEPAISTEKHHICKVIVAWMPFVLLTITIIIWTQPWFKALFK EGGALAFSSFAFEFNSISQKVFKTVPIVTEATNFPVVFKFPLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMR LPILTIGVVLAFAYVANYSGMSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTLIAYVFPFIIPVTPT
Sequences:
>Translated_549_residues MEFYQVYDPLGHIWLSALVALSPIALFFISLIVFKLKGYSAGFLSLVLSIIIALFVYKMPAQMVSASFFYGFLYGLWPIA WIVIAAIFLYNLSVKSGYFEILKESILTLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCL IANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFKGIRETFPAVAVTGFSFAIAQFLS SNYLGPQLPDIISALVSLIATTLFLKFWQPKRIFTSNGKEPAISTEKHHICKVIVAWMPFVLLTITIIIWTQPWFKALFK EGGALAFSSFAFEFNSISQKVFKTVPIVTEATNFPVVFKFPLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMR LPILTIGVVLAFAYVANYSGMSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTLIAYVFPFIIPVTPT >Mature_549_residues MEFYQVYDPLGHIWLSALVALSPIALFFISLIVFKLKGYSAGFLSLVLSIIIALFVYKMPAQMVSASFFYGFLYGLWPIA WIVIAAIFLYNLSVKSGYFEILKESILTLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCL IANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFKGIRETFPAVAVTGFSFAIAQFLS SNYLGPQLPDIISALVSLIATTLFLKFWQPKRIFTSNGKEPAISTEKHHICKVIVAWMPFVLLTITIIIWTQPWFKALFK EGGALAFSSFAFEFNSISQKVFKTVPIVTEATNFPVVFKFPLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMR LPILTIGVVLAFAYVANYSGMSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTLIAYVFPFIIPVTPT
Specific function: Transports L-lactate across the membrane. Can also transport D-lactate and glycolate. Seems to be driven by a proton motive force [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1790031, Length=548, Percent_Identity=58.2116788321168, Blast_Score=608, Evalue=1e-175, Organism=Escherichia coli, GI1789347, Length=553, Percent_Identity=55.5153707052441, Blast_Score=573, Evalue=1e-165,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 59190; Mature: 59190
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFYQVYDPLGHIWLSALVALSPIALFFISLIVFKLKGYSAGFLSLVLSIIIALFVYKMP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AQMVSASFFYGFLYGLWPIAWIVIAAIFLYNLSVKSGYFEILKESILTLTPDHRILVILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCHHHHHHH GFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCLIANTAPVAFGAVGIPITAMA HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCCHHHEECCCCHHHCCCCCCHHHHH SVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFKGIRETFPAVAVTGFSFAIAQFLS HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SNYLGPQLPDIISALVSLIATTLFLKFWQPKRIFTSNGKEPAISTEKHHICKVIVAWMPF CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHH VLLTITIIIWTQPWFKALFKEGGALAFSSFAFEFNSISQKVFKTVPIVTEATNFPVVFKF HHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEE PLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMRLPILTIGVVLAFAYVANYSG CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC MSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL CHHHEEEEEECCCCHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEE AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTLIAYVF EECCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHH PFIIPVTPT HHHCCCCCC >Mature Secondary Structure MEFYQVYDPLGHIWLSALVALSPIALFFISLIVFKLKGYSAGFLSLVLSIIIALFVYKMP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AQMVSASFFYGFLYGLWPIAWIVIAAIFLYNLSVKSGYFEILKESILTLTPDHRILVILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCHHHHHHH GFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCLIANTAPVAFGAVGIPITAMA HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCCHHHEECCCCHHHCCCCCCHHHHH SVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFKGIRETFPAVAVTGFSFAIAQFLS HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SNYLGPQLPDIISALVSLIATTLFLKFWQPKRIFTSNGKEPAISTEKHHICKVIVAWMPF CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHH VLLTITIIIWTQPWFKALFKEGGALAFSSFAFEFNSISQKVFKTVPIVTEATNFPVVFKF HHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEE PLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMRLPILTIGVVLAFAYVANYSG CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC MSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL CHHHEEEEEECCCCHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEE AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTLIAYVF EECCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHH PFIIPVTPT HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; lactate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]