| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188526939
Identifier: 188526939
GI number: 188526939
Start: 131466
End: 131600
Strand: Direct
Name: 188526939
Synonym: HPSH_00680
Alternate gene names: NA
Gene position: 131466-131600 (Clockwise)
Preceding gene: 188526938
Following gene: 188526944
Centisome position: 8.17
GC content: 34.07
Gene sequence:
>135_bases ATGAGAATTTCTTTTTTAGCTGTAATTTTAGCACTGTTGTTTGTGGCGTGCCATGAAACTAAAAAACAAATTTTACAAAA CGAAGCCGATAGCACCCCTTCAGAAAAAACCATTTGGCAACCTGAACAAAAATAA
Upstream 100 bases:
>100_bases GCTCAAAAAACAGCGCGCTTAGTTAAAAAGAGATTAATCTTTCTTTAACTCTTTTTCTTTATAATTATCGTTAGCATTTT AATATTTAAAGGAGCTTGAA
Downstream 100 bases:
>100_bases AAATTGTAAAAACACTCAAAGGCATTTTTAAAATAAACGCAATAAAAAAGCTAATGGGTGGTCGTCTTTTGTAAAGCGAT CTTAAGGGCTATTAAAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 44
Protein sequence:
>44_residues MRISFLAVILALLFVACHETKKQILQNEADSTPSEKTIWQPEQK
Sequences:
>Translated_44_residues MRISFLAVILALLFVACHETKKQILQNEADSTPSEKTIWQPEQK >Mature_44_residues MRISFLAVILALLFVACHETKKQILQNEADSTPSEKTIWQPEQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5057; Mature: 5057
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISFLAVILALLFVACHETKKQILQNEADSTPSEKTIWQPEQK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRISFLAVILALLFVACHETKKQILQNEADSTPSEKTIWQPEQK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]